RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0020620 | Gene ID |
|
Accession |
- |
Symbol |
Msh3 |
Alias |
- |
Full Name |
mutS homolog 3 |
Status |
Confidence |
Length |
151884 bases |
Strand |
Minus strand |
Position |
13 : 88620565 - 88772448 |
RNA binding domain |
MutS_II |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0037519 |
MutS_II |
PF05188 |
1.8e-33 |
1 |
MGP_FVBNJ_P0037514 |
MutS_II |
PF05188 |
1.8e-33 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Msh3-001 |
MGP_FVBNJ_T0037514 |
3946 |
1095aa |
MGP_FVBNJ_P0037514"/note="transcript_id=MGP_FVBNJ_T0037514 |
- |
MGP_FVBNJ_T0037515 |
1363 |
No protein |
- |
- |
MGP_FVBNJ_T0037516 |
1796 |
No protein |
- |
- |
MGP_FVBNJ_T0037517 |
4253 |
159aa |
MGP_FVBNJ_P0037517"/note="transcript_id=MGP_FVBNJ_T0037517 |
- |
MGP_FVBNJ_T0037518 |
1555 |
No protein |
- |
- |
MGP_FVBNJ_T0037519 |
3937 |
1094aa |
MGP_FVBNJ_P0037519"/note="transcript_id=MGP_FVBNJ_T0037519 |
- |
MGP_FVBNJ_T0037520 |
633 |
129aa |
MGP_FVBNJ_P0037520"/note="transcript_id=MGP_FVBNJ_T0037520 |
- |
MGP_FVBNJ_T0037521 |
534 |
101aa |
MGP_FVBNJ_P0037521"/note="transcript_id=MGP_FVBNJ_T0037521 |
- |
MGP_FVBNJ_T0037523 |
1961 |
No protein |
- |
- |
MGP_FVBNJ_T0037524 |
4137 |
56aa |
MGP_FVBNJ_P0037524"/note="transcript_id=MGP_FVBNJ_T0037524 |
- |
MGP_FVBNJ_T0037525 |
625 |
No protein |
- |
- |
MGP_FVBNJ_T0037526 |
1753 |
No protein |
- |
- |
MGP_FVBNJ_T0037527 |
1816 |
No protein |
- |
- |
MGP_FVBNJ_T0037528 |
666 |
167aa |
MGP_FVBNJ_P0037528"/note="transcript_id=MGP_FVBNJ_T0037528 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0020620 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 98.9954 | 97.8995 | mus_caroli | MGP_CAROLIEiJ_P0035086 | 98.9954 | 97.8995 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0037788 | 100 | 100 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.726 | 99.726 | mus_musculus_aj | MGP_AJ_P0037731 | 99.726 | 99.726 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.8174 | 99.726 | mus_musculus_balbcj | MGP_BALBcJ_P0037743 | 99.8174 | 99.726 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.8174 | 99.6347 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0038204 | 99.8174 | 99.6347 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0037548 | 100 | 100 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0037404 | 100 | 100 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.6347 | 99.6347 | mus_musculus_c3hhej | MGP_C3HHeJ_P0037496 | 99.6347 | 99.6347 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0037668 | 100 | 100 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.0868 | 98.1735 | mus_spretus | MGP_SPRETEiJ_P0036759 | 99.0868 | 98.1735 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.6347 | 99.6347 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0038256 | 99.6347 | 99.6347 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.8174 | 99.6347 | mus_musculus | ENSMUSP00000140002 | 99.8174 | 99.6347 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.6347 | 99.2694 | mus_musculus_pwkphj | MGP_PWKPhJ_P0037098 | 99.6347 | 99.2694 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 98.6301 | 96.347 | mus_pahari | MGP_PahariEiJ_P0026750 | 98.6301 | 96.347 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.3607 | 98.4475 | mus_spicilegus | ENSMSIP00000014867 | 99.3607 | 98.4475 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.6347 | 99.1781 | mus_musculus_casteij | MGP_CASTEiJ_P0037464 | 99.6347 | 99.1781 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.8174 | 99.6347 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0037507 | 99.8174 | 99.6347 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.8174 | 99.726 | mus_musculus_wsbeij | MGP_WSBEiJ_P0036905 | 99.8174 | 99.726 |
MGP_FVBNJ_G0020620 | mus_musculus_fvbnj | MGP_FVBNJ_P0037514 | 99.6347 | 99.6347 | mus_musculus_akrj | MGP_AKRJ_P0037694 | 99.6347 | 99.6347 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |