Description

Ensembl ID MGP_FVBNJ_G0020620 Gene ID Accession -
Symbol Msh3 Alias - Full Name mutS homolog 3
Status Confidence Length 151884 bases Strand Minus strand
Position 13 : 88620565 - 88772448 RNA binding domain MutS_II
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0037519 MutS_II PF05188 1.8e-33 1
MGP_FVBNJ_P0037514 MutS_II PF05188 1.8e-33 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Msh3-001 MGP_FVBNJ_T0037514 3946 1095aa MGP_FVBNJ_P0037514"/note="transcript_id=MGP_FVBNJ_T0037514
- MGP_FVBNJ_T0037515 1363 No protein -
- MGP_FVBNJ_T0037516 1796 No protein -
- MGP_FVBNJ_T0037517 4253 159aa MGP_FVBNJ_P0037517"/note="transcript_id=MGP_FVBNJ_T0037517
- MGP_FVBNJ_T0037518 1555 No protein -
- MGP_FVBNJ_T0037519 3937 1094aa MGP_FVBNJ_P0037519"/note="transcript_id=MGP_FVBNJ_T0037519
- MGP_FVBNJ_T0037520 633 129aa MGP_FVBNJ_P0037520"/note="transcript_id=MGP_FVBNJ_T0037520
- MGP_FVBNJ_T0037521 534 101aa MGP_FVBNJ_P0037521"/note="transcript_id=MGP_FVBNJ_T0037521
- MGP_FVBNJ_T0037523 1961 No protein -
- MGP_FVBNJ_T0037524 4137 56aa MGP_FVBNJ_P0037524"/note="transcript_id=MGP_FVBNJ_T0037524
- MGP_FVBNJ_T0037525 625 No protein -
- MGP_FVBNJ_T0037526 1753 No protein -
- MGP_FVBNJ_T0037527 1816 No protein -
- MGP_FVBNJ_T0037528 666 167aa MGP_FVBNJ_P0037528"/note="transcript_id=MGP_FVBNJ_T0037528

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0020620

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751498.995497.8995mus_caroliMGP_CAROLIEiJ_P003508698.995497.8995
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P0037514100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0037788100100
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.72699.726mus_musculus_ajMGP_AJ_P003773199.72699.726
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.817499.726mus_musculus_balbcjMGP_BALBcJ_P003774399.817499.726
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.817499.6347mus_musculus_c57bl6njMGP_C57BL6NJ_P003820499.817499.6347
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P0037514100100mus_musculus_dba2jMGP_DBA2J_P0037548100100
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P0037514100100mus_musculus_cbajMGP_CBAJ_P0037404100100
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.634799.6347mus_musculus_c3hhejMGP_C3HHeJ_P003749699.634799.6347
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P0037514100100mus_musculus_lpjMGP_LPJ_P0037668100100
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.086898.1735mus_spretusMGP_SPRETEiJ_P003675999.086898.1735
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.634799.6347mus_musculus_nzohlltjMGP_NZOHlLtJ_P003825699.634799.6347
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.817499.6347mus_musculusENSMUSP0000014000299.817499.6347
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.634799.2694mus_musculus_pwkphjMGP_PWKPhJ_P003709899.634799.2694
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751498.630196.347mus_pahariMGP_PahariEiJ_P002675098.630196.347
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.360798.4475mus_spicilegusENSMSIP0000001486799.360798.4475
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.634799.1781mus_musculus_casteijMGP_CASTEiJ_P003746499.634799.1781
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.817499.6347mus_musculus_nodshiltjMGP_NODShiLtJ_P003750799.817499.6347
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.817499.726mus_musculus_wsbeijMGP_WSBEiJ_P003690599.817499.726
MGP_FVBNJ_G0020620mus_musculus_fvbnjMGP_FVBNJ_P003751499.634799.6347mus_musculus_akrjMGP_AKRJ_P003769499.634799.6347

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression