Description

Ensembl ID MGP_FVBNJ_G0020270 Gene ID Accession -
Symbol Rpp40 Alias - Full Name ribonuclease P 40 subunit
Status Confidence Length 12874 bases Strand Minus strand
Position 13 : 32125878 - 32138751 RNA binding domain Ribonuc_P_40
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0036493 Ribonuc_P_40 PF08584 3.3e-94 1
MGP_FVBNJ_P0036496 Ribonuc_P_40 PF08584 3.3e-78 1
MGP_FVBNJ_P0036494 Ribonuc_P_40 PF08584 2.1e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpp40-001 MGP_FVBNJ_T0036493 4366 363aa MGP_FVBNJ_P0036493"/note="transcript_id=MGP_FVBNJ_T0036493
- MGP_FVBNJ_T0036494 276 83aa MGP_FVBNJ_P0036494"/note="transcript_id=MGP_FVBNJ_T0036494
- MGP_FVBNJ_T0036495 3269 No protein -
- MGP_FVBNJ_T0036496 1053 340aa MGP_FVBNJ_P0036496"/note="transcript_id=MGP_FVBNJ_T0036496

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0020270

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649398.622698.3471mus_caroliMGP_CAROLIEiJ_P003410398.622698.3471
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0036763100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_ajMGP_AJ_P0036696100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_balbcjMGP_BALBcJ_P0036716100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0037176100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649399.724599.449mus_musculus_dba2jMGP_DBA2J_P003652299.724599.449
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_cbajMGP_CBAJ_P0036376100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_lpjMGP_LPJ_P0036657100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649399.173699.1736mus_spretusMGP_SPRETEiJ_P003571099.173699.1736
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0037227100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculusENSMUSP00000130290100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_pwkphjMGP_PWKPhJ_P0036041100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649398.347196.6942mus_pahariMGP_PahariEiJ_P004071298.347196.6942
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649399.724599.449mus_spicilegusENSMSIP0000002050399.724599.449
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649399.724599.7245mus_musculus_casteijMGP_CASTEiJ_P003639099.724599.7245
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0036489100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_wsbeijMGP_WSBEiJ_P0035889100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P0036493100100mus_musculus_akrjMGP_AKRJ_P0036665100100
MGP_FVBNJ_G0020270mus_musculus_fvbnjMGP_FVBNJ_P003649397.245293.6639rattus_norvegicusENSRNOP0000006296293.88390.4255

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression