RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0019907 | Gene ID |
|
Accession |
- |
Symbol |
Papola |
Alias |
- |
Full Name |
poly (A) polymerase alpha |
Status |
Confidence |
Length |
54883 bases |
Strand |
Plus strand |
Position |
12 : 101962665 - 102017547 |
RNA binding domain |
PAP_RNA-bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0035621 |
PAP_RNA-bind |
PF04926 |
1.5e-26 |
1 |
MGP_FVBNJ_P0035621 |
PAP_RNA-bind |
PF04926 |
1.5e-26 |
2 |
MGP_FVBNJ_P0035620 |
PAP_RNA-bind |
PF04926 |
1.6e-25 |
1 |
MGP_FVBNJ_P0035608 |
PAP_RNA-bind |
PF04926 |
8.6e-25 |
1 |
MGP_FVBNJ_P0035609 |
PAP_RNA-bind |
PF04926 |
1.2e-24 |
1 |
MGP_FVBNJ_P0035606 |
PAP_RNA-bind |
PF04926 |
1.6e-24 |
1 |
MGP_FVBNJ_P0035616 |
PAP_RNA-bind |
PF04926 |
2e-24 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Papola-001 |
MGP_FVBNJ_T0035606 |
2436 |
732aa |
MGP_FVBNJ_P0035606"/note="transcript_id=MGP_FVBNJ_T0035606 |
- |
MGP_FVBNJ_T0035607 |
726 |
No protein |
- |
- |
MGP_FVBNJ_T0035608 |
2544 |
693aa |
MGP_FVBNJ_P0035608"/note="transcript_id=MGP_FVBNJ_T0035608 |
- |
MGP_FVBNJ_T0035609 |
4488 |
739aa |
MGP_FVBNJ_P0035609"/note="transcript_id=MGP_FVBNJ_T0035609 |
- |
MGP_FVBNJ_T0035610 |
2076 |
No protein |
- |
- |
MGP_FVBNJ_T0035611 |
2223 |
111aa |
MGP_FVBNJ_P0035611"/note="transcript_id=MGP_FVBNJ_T0035611 |
- |
MGP_FVBNJ_T0035612 |
809 |
No protein |
- |
- |
MGP_FVBNJ_T0035613 |
4355 |
168aa |
MGP_FVBNJ_P0035613"/note="transcript_id=MGP_FVBNJ_T0035613 |
- |
MGP_FVBNJ_T0035614 |
529 |
66aa |
MGP_FVBNJ_P0035614"/note="transcript_id=MGP_FVBNJ_T0035614 |
- |
MGP_FVBNJ_T0035615 |
1033 |
293aa |
MGP_FVBNJ_P0035615"/note="transcript_id=MGP_FVBNJ_T0035615 |
- |
MGP_FVBNJ_T0035616 |
2605 |
718aa |
MGP_FVBNJ_P0035616"/note="transcript_id=MGP_FVBNJ_T0035616 |
- |
MGP_FVBNJ_T0035617 |
1172 |
No protein |
- |
- |
MGP_FVBNJ_T0035618 |
701 |
94aa |
MGP_FVBNJ_P0035618"/note="transcript_id=MGP_FVBNJ_T0035618 |
- |
MGP_FVBNJ_T0035619 |
295 |
No protein |
- |
- |
MGP_FVBNJ_T0035620 |
1508 |
418aa |
MGP_FVBNJ_P0035620"/note="transcript_id=MGP_FVBNJ_T0035620 |
- |
MGP_FVBNJ_T0035621 |
966 |
321aa |
MGP_FVBNJ_P0035621"/note="transcript_id=MGP_FVBNJ_T0035621 |
- |
MGP_FVBNJ_T0035622 |
581 |
No protein |
- |
- |
MGP_FVBNJ_T0035623 |
686 |
119aa |
MGP_FVBNJ_P0035623"/note="transcript_id=MGP_FVBNJ_T0035623 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0028080 | 74.1543 | 60.4871 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 74.1543 | 60.4871 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 99.3234 | 99.3234 | mus_caroli | MGP_CAROLIEiJ_P0033274 | 99.3234 | 99.3234 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0035882 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0035797 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0035803 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0036297 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0035628 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0035488 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0035571 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0035777 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 99.8647 | 99.8647 | mus_spretus | MGP_SPRETEiJ_P0034820 | 99.8647 | 99.8647 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0036323 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus | ENSMUSP00000105527 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 99.8647 | 99.8647 | mus_musculus_pwkphj | MGP_PWKPhJ_P0035179 | 99.8647 | 99.8647 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0083389 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 12.0433 | 9.06631 | mus_spicilegus | ENSMSIP00000022173 | 76.0684 | 57.265 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 99.8647 | 99.7294 | mus_spicilegus | ENSMSIP00000011817 | 98.5314 | 98.3979 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 99.8647 | 99.8647 | mus_musculus_casteij | MGP_CASTEiJ_P0035520 | 99.8647 | 99.8647 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0035615 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0035021 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0035777 | 100 | 100 |
MGP_FVBNJ_G0019907 | mus_musculus_fvbnj | MGP_FVBNJ_P0035609 | 96.4817 | 95.1286 | rattus_norvegicus | ENSRNOP00000082223 | 94.0633 | 92.7441 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |