Description

Ensembl ID MGP_FVBNJ_G0019907 Gene ID Accession -
Symbol Papola Alias - Full Name poly (A) polymerase alpha
Status Confidence Length 54883 bases Strand Plus strand
Position 12 : 101962665 - 102017547 RNA binding domain PAP_RNA-bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0035621 PAP_RNA-bind PF04926 1.5e-26 1
MGP_FVBNJ_P0035621 PAP_RNA-bind PF04926 1.5e-26 2
MGP_FVBNJ_P0035620 PAP_RNA-bind PF04926 1.6e-25 1
MGP_FVBNJ_P0035608 PAP_RNA-bind PF04926 8.6e-25 1
MGP_FVBNJ_P0035609 PAP_RNA-bind PF04926 1.2e-24 1
MGP_FVBNJ_P0035606 PAP_RNA-bind PF04926 1.6e-24 1
MGP_FVBNJ_P0035616 PAP_RNA-bind PF04926 2e-24 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Papola-001 MGP_FVBNJ_T0035606 2436 732aa MGP_FVBNJ_P0035606"/note="transcript_id=MGP_FVBNJ_T0035606
- MGP_FVBNJ_T0035607 726 No protein -
- MGP_FVBNJ_T0035608 2544 693aa MGP_FVBNJ_P0035608"/note="transcript_id=MGP_FVBNJ_T0035608
- MGP_FVBNJ_T0035609 4488 739aa MGP_FVBNJ_P0035609"/note="transcript_id=MGP_FVBNJ_T0035609
- MGP_FVBNJ_T0035610 2076 No protein -
- MGP_FVBNJ_T0035611 2223 111aa MGP_FVBNJ_P0035611"/note="transcript_id=MGP_FVBNJ_T0035611
- MGP_FVBNJ_T0035612 809 No protein -
- MGP_FVBNJ_T0035613 4355 168aa MGP_FVBNJ_P0035613"/note="transcript_id=MGP_FVBNJ_T0035613
- MGP_FVBNJ_T0035614 529 66aa MGP_FVBNJ_P0035614"/note="transcript_id=MGP_FVBNJ_T0035614
- MGP_FVBNJ_T0035615 1033 293aa MGP_FVBNJ_P0035615"/note="transcript_id=MGP_FVBNJ_T0035615
- MGP_FVBNJ_T0035616 2605 718aa MGP_FVBNJ_P0035616"/note="transcript_id=MGP_FVBNJ_T0035616
- MGP_FVBNJ_T0035617 1172 No protein -
- MGP_FVBNJ_T0035618 701 94aa MGP_FVBNJ_P0035618"/note="transcript_id=MGP_FVBNJ_T0035618
- MGP_FVBNJ_T0035619 295 No protein -
- MGP_FVBNJ_T0035620 1508 418aa MGP_FVBNJ_P0035620"/note="transcript_id=MGP_FVBNJ_T0035620
- MGP_FVBNJ_T0035621 966 321aa MGP_FVBNJ_P0035621"/note="transcript_id=MGP_FVBNJ_T0035621
- MGP_FVBNJ_T0035622 581 No protein -
- MGP_FVBNJ_T0035623 686 119aa MGP_FVBNJ_P0035623"/note="transcript_id=MGP_FVBNJ_T0035623

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P002808074.154360.4871mus_musculus_fvbnjMGP_FVBNJ_P003560974.154360.4871

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560999.323499.3234mus_caroliMGP_CAROLIEiJ_P003327499.323499.3234
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0035882100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_ajMGP_AJ_P0035797100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_balbcjMGP_BALBcJ_P0035803100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0036297100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_dba2jMGP_DBA2J_P0035628100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_cbajMGP_CBAJ_P0035488100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_c3hhejMGP_C3HHeJ_P0035571100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_lpjMGP_LPJ_P0035777100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560999.864799.8647mus_spretusMGP_SPRETEiJ_P003482099.864799.8647
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0036323100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculusENSMUSP00000105527100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560999.864799.8647mus_musculus_pwkphjMGP_PWKPhJ_P003517999.864799.8647
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_pahariMGP_PahariEiJ_P0083389100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560912.04339.06631mus_spicilegusENSMSIP0000002217376.068457.265
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560999.864799.7294mus_spicilegusENSMSIP0000001181798.531498.3979
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560999.864799.8647mus_musculus_casteijMGP_CASTEiJ_P003552099.864799.8647
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0035615100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_wsbeijMGP_WSBEiJ_P0035021100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P0035609100100mus_musculus_akrjMGP_AKRJ_P0035777100100
MGP_FVBNJ_G0019907mus_musculus_fvbnjMGP_FVBNJ_P003560996.481795.1286rattus_norvegicusENSRNOP0000008222394.063392.7441

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression