RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0019024 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
4069 bases |
Strand |
Plus strand |
Position |
11 : 98988178 - 98992246 |
RNA binding domain |
Ribosomal_L27e , KOW |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0032340 |
Ribosomal_L27e |
PF01777 |
1.5e-39 |
1 |
MGP_FVBNJ_P0032340 |
KOW |
PF00467 |
9.8e-06 |
2 |
MGP_FVBNJ_P0032342 |
Ribosomal_L27e |
PF01777 |
1.5e-39 |
1 |
MGP_FVBNJ_P0032342 |
KOW |
PF00467 |
9.8e-06 |
2 |
MGP_FVBNJ_P0032343 |
Ribosomal_L27e |
PF01777 |
1.7e-28 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
MGP_FVBNJ_T0032340 |
614 |
136aa |
MGP_FVBNJ_P0032340"/note="transcript_id=MGP_FVBNJ_T0032340 |
- |
MGP_FVBNJ_T0032341 |
536 |
No protein |
- |
- |
MGP_FVBNJ_T0032342 |
732 |
136aa |
MGP_FVBNJ_P0032342"/note="transcript_id=MGP_FVBNJ_T0032342 |
- |
MGP_FVBNJ_T0032343 |
306 |
87aa |
MGP_FVBNJ_P0032343"/note="transcript_id=MGP_FVBNJ_T0032343 |
- |
MGP_FVBNJ_T0032344 |
548 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0019024 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 83.0882 | 83.0882 | mus_caroli | MGP_CAROLIEiJ_P0048674 | 95.7627 | 95.7627 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 75 | 67.6471 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0032569 | 73.3813 | 66.187 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0032510 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 77.2059 | 69.8529 | mus_musculus_balbcj | MGP_BALBcJ_P0032503 | 75.5396 | 68.3453 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 89.7059 | 89.7059 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0032348 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0032205 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0032290 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0032467 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0031496 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0033039 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus | ENSMUSP00000102870 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 43.3824 | 39.7059 | mus_musculus_pwkphj | MGP_PWKPhJ_P0031806 | 72.8395 | 66.6667 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 99.2647 | mus_pahari | MGP_PahariEiJ_P0036793 | 100 | 99.2647 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_spicilegus | ENSMSIP00000030956 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 99.2647 | mus_spicilegus | ENSMSIP00000008025 | 100 | 99.2647 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0032099 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0032336 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 82.3529 | 78.6765 | mus_musculus_wsbeij | MGP_WSBEiJ_P0031761 | 82.3529 | 78.6765 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0032492 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 94.8529 | 94.1176 | rattus_norvegicus | ENSRNOP00000079542 | 94.8529 | 94.1176 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 100 | 100 | rattus_norvegicus | ENSRNOP00000028060 | 100 | 100 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 69.1176 | 63.9706 | rattus_norvegicus | ENSRNOP00000082623 | 89.5238 | 82.8571 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 97.0588 | 95.5882 | rattus_norvegicus | ENSRNOP00000049416 | 97.7778 | 96.2963 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 57.3529 | 50.7353 | rattus_norvegicus | ENSRNOP00000060629 | 76.4706 | 67.6471 |
MGP_FVBNJ_G0019024 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 98.5294 | 97.0588 | rattus_norvegicus | ENSRNOP00000081613 | 98.5294 | 97.0588 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |