Description

Ensembl ID MGP_FVBNJ_G0019024 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 4069 bases Strand Plus strand
Position 11 : 98988178 - 98992246 RNA binding domain Ribosomal_L27e , KOW
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0032340 Ribosomal_L27e PF01777 1.5e-39 1
MGP_FVBNJ_P0032340 KOW PF00467 9.8e-06 2
MGP_FVBNJ_P0032342 Ribosomal_L27e PF01777 1.5e-39 1
MGP_FVBNJ_P0032342 KOW PF00467 9.8e-06 2
MGP_FVBNJ_P0032343 Ribosomal_L27e PF01777 1.7e-28 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- MGP_FVBNJ_T0032340 614 136aa MGP_FVBNJ_P0032340"/note="transcript_id=MGP_FVBNJ_T0032340
- MGP_FVBNJ_T0032341 536 No protein -
- MGP_FVBNJ_T0032342 732 136aa MGP_FVBNJ_P0032342"/note="transcript_id=MGP_FVBNJ_T0032342
- MGP_FVBNJ_T0032343 306 87aa MGP_FVBNJ_P0032343"/note="transcript_id=MGP_FVBNJ_T0032343
- MGP_FVBNJ_T0032344 548 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0019024

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234283.088283.0882mus_caroliMGP_CAROLIEiJ_P004867495.762795.7627
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P00323427567.6471mus_musculus_129s1svimjMGP_129S1SvImJ_P003256973.381366.187
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_ajMGP_AJ_P0032510100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234277.205969.8529mus_musculus_balbcjMGP_BALBcJ_P003250375.539668.3453
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234289.705989.7059mus_musculus_c57bl6njMGP_C57BL6NJ_P003301289.705989.7059
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_dba2jMGP_DBA2J_P0032348100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_cbajMGP_CBAJ_P0032205100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_c3hhejMGP_C3HHeJ_P0032290100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_lpjMGP_LPJ_P0032467100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_spretusMGP_SPRETEiJ_P0031496100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0033039100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculusENSMUSP00000102870100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234243.382439.7059mus_musculus_pwkphjMGP_PWKPhJ_P003180672.839566.6667
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234210099.2647mus_pahariMGP_PahariEiJ_P003679310099.2647
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_spicilegusENSMSIP00000030956100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234210099.2647mus_spicilegusENSMSIP0000000802510099.2647
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_casteijMGP_CASTEiJ_P0032099100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0032336100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234282.352978.6765mus_musculus_wsbeijMGP_WSBEiJ_P003176182.352978.6765
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100mus_musculus_akrjMGP_AKRJ_P0032492100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234294.852994.1176rattus_norvegicusENSRNOP0000007954294.852994.1176
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P0032342100100rattus_norvegicusENSRNOP00000028060100100
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234269.117663.9706rattus_norvegicusENSRNOP0000008262389.523882.8571
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234297.058895.5882rattus_norvegicusENSRNOP0000004941697.777896.2963
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234257.352950.7353rattus_norvegicusENSRNOP0000006062976.470667.6471
MGP_FVBNJ_G0019024mus_musculus_fvbnjMGP_FVBNJ_P003234298.529497.0588rattus_norvegicusENSRNOP0000008161398.529497.0588

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression