RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0018986 | Gene ID |
|
Accession |
- |
Symbol |
Dhx58 |
Alias |
- |
Full Name |
DEXH (Asp-Glu-X-His) box polypeptide 58 |
Status |
Confidence |
Length |
9835 bases |
Strand |
Minus strand |
Position |
11 : 98220128 - 98229962 |
RNA binding domain |
ResIII , DEAD , RIG-I_C , RIG-I_C-RD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0032175 |
ResIII |
PF04851 |
4e-22 |
1 |
MGP_FVBNJ_P0032175 |
DEAD |
PF00270 |
3.4e-17 |
2 |
MGP_FVBNJ_P0032175 |
RIG-I_C |
PF18119 |
2.1e-31 |
3 |
MGP_FVBNJ_P0032175 |
RIG-I_C-RD |
PF11648 |
3.7e-33 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Dhx58-001 |
MGP_FVBNJ_T0032175 |
2412 |
678aa |
MGP_FVBNJ_P0032175"/note="transcript_id=MGP_FVBNJ_T0032175 |
- |
MGP_FVBNJ_T0032176 |
786 |
No protein |
- |
- |
MGP_FVBNJ_T0032177 |
529 |
No protein |
- |
- |
MGP_FVBNJ_T0032178 |
744 |
No protein |
- |
- |
MGP_FVBNJ_T0032179 |
440 |
No protein |
- |
- |
MGP_FVBNJ_T0032180 |
982 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0054702 | 41.3659 | 28.6829 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 62.5369 | 43.3628 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0064709 | 38.1209 | 23.7581 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 52.0649 | 32.4484 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 99.2625 | 98.3776 | mus_caroli | MGP_CAROLIEiJ_P0029903 | 99.2625 | 98.3776 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0032402 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_aj | MGP_AJ_P0032344 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_balbcj | MGP_BALBcJ_P0032333 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0032845 | 100 | 100 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_dba2j | MGP_DBA2J_P0032182 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_cbaj | MGP_CBAJ_P0032035 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_c3hhej | MGP_C3HHeJ_P0032126 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_lpj | MGP_LPJ_P0032298 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 99.8525 | 99.705 | mus_spretus | MGP_SPRETEiJ_P0031323 | 99.8525 | 99.705 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0032868 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 100 | mus_musculus | ENSMUSP00000017974 | 100 | 100 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_pwkphj | MGP_PWKPhJ_P0031635 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 97.7876 | 95.5752 | mus_pahari | MGP_PahariEiJ_P0036629 | 97.7876 | 95.5752 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 99.8525 | 99.5575 | mus_spicilegus | ENSMSIP00000005034 | 99.8525 | 99.5575 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 99.705 | 99.2625 | mus_musculus_casteij | MGP_CASTEiJ_P0031926 | 99.705 | 99.2625 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0032165 | 100 | 100 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_wsbeij | MGP_WSBEiJ_P0031595 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 100 | 99.8525 | mus_musculus_akrj | MGP_AKRJ_P0032325 | 100 | 99.8525 |
MGP_FVBNJ_G0018986 | mus_musculus_fvbnj | MGP_FVBNJ_P0032175 | 94.9853 | 91.5929 | rattus_norvegicus | ENSRNOP00000024718 | 94.9853 | 91.5929 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |