| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_FVBNJ_G0017859 | Gene ID |
|
Accession |
- |
| Symbol |
Tbrg4 |
Alias |
- |
Full Name |
transforming growth factor beta regulated gene 4 |
| Status |
Confidence |
Length |
13504 bases |
Strand |
Minus strand |
| Position |
11 : 3527847 - 3541350 |
RNA binding domain |
RAP , FAST_2 , FAST_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_FVBNJ_P0027805 |
RAP |
PF08373 |
3.5e-10 |
1 |
| MGP_FVBNJ_P0027805 |
FAST_2 |
PF08368 |
2.1e-25 |
2 |
| MGP_FVBNJ_P0027805 |
FAST_1 |
PF06743 |
5.2e-21 |
3 |
| MGP_FVBNJ_P0027806 |
RAP |
PF08373 |
3.5e-10 |
1 |
| MGP_FVBNJ_P0027806 |
FAST_2 |
PF08368 |
2.1e-25 |
2 |
| MGP_FVBNJ_P0027806 |
FAST_1 |
PF06743 |
5.2e-21 |
3 |
| MGP_FVBNJ_P0027807 |
RAP |
PF08373 |
3.5e-10 |
1 |
| MGP_FVBNJ_P0027807 |
FAST_2 |
PF08368 |
2.1e-25 |
2 |
| MGP_FVBNJ_P0027807 |
FAST_1 |
PF06743 |
5.2e-21 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Tbrg4-001 |
MGP_FVBNJ_T0027805 |
2324 |
630aa |
MGP_FVBNJ_P0027805"/note="transcript_id=MGP_FVBNJ_T0027805 |
| - |
MGP_FVBNJ_T0027806 |
2347 |
630aa |
MGP_FVBNJ_P0027806"/note="transcript_id=MGP_FVBNJ_T0027806 |
| - |
MGP_FVBNJ_T0027807 |
2290 |
630aa |
MGP_FVBNJ_P0027807"/note="transcript_id=MGP_FVBNJ_T0027807 |
| - |
MGP_FVBNJ_T0027808 |
2241 |
365aa |
MGP_FVBNJ_P0027808"/note="transcript_id=MGP_FVBNJ_T0027808 |
| - |
MGP_FVBNJ_T0027809 |
682 |
No protein |
- |
| - |
MGP_FVBNJ_T0027810 |
582 |
No protein |
- |
| - |
MGP_FVBNJ_T0027811 |
602 |
No protein |
- |
| - |
MGP_FVBNJ_T0027812 |
652 |
No protein |
- |
| - |
MGP_FVBNJ_T0027813 |
380 |
No protein |
- |
| - |
MGP_FVBNJ_T0027814 |
647 |
158aa |
MGP_FVBNJ_P0027814"/note="transcript_id=MGP_FVBNJ_T0027814 |
| - |
MGP_FVBNJ_T0027815 |
853 |
No protein |
- |
| - |
MGP_FVBNJ_T0027816 |
540 |
112aa |
MGP_FVBNJ_P0027816"/note="transcript_id=MGP_FVBNJ_T0027816 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0054851 | 32.3281 | 16.0434 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 42.5397 | 21.1111 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0020065 | 32.0755 | 14.6589 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 35.0794 | 16.0317 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0057396 | 26.7658 | 13.1351 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 34.2857 | 16.8254 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0037252 | 34.1906 | 18.003 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 35.873 | 18.8889 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0070096 | 33.7615 | 17.7982 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 29.2063 | 15.3968 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 99.0476 | 98.254 | mus_caroli | MGP_CAROLIEiJ_P0025632 | 99.0476 | 98.254 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028016 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0027985 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0027965 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0028462 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0027817 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0027690 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027761 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0027933 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 99.8413 | 99.6825 | mus_spretus | MGP_SPRETEiJ_P0026969 | 99.8413 | 99.6825 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0028491 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus | ENSMUSP00000140835 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0027065 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 98.5714 | 97.4603 | mus_pahari | MGP_PahariEiJ_P0030309 | 98.7281 | 97.6153 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 99.6825 | 98.8889 | mus_spicilegus | ENSMSIP00000027295 | 99.6825 | 98.8889 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0027369 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027788 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0027272 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0027945 | 100 | 100 |
| MGP_FVBNJ_G0017859 | mus_musculus_fvbnj | MGP_FVBNJ_P0027806 | 96.5079 | 92.5397 | rattus_norvegicus | ENSRNOP00000074223 | 96.6614 | 92.6868 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |