| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_FVBNJ_G0016426 | Gene ID |
|
Accession |
- |
| Symbol |
Trmt1l |
Alias |
- |
Full Name |
tRNA methyltransferase 1 like |
| Status |
Confidence |
Length |
31510 bases |
Strand |
Plus strand |
| Position |
1 : 147349901 - 147381410 |
RNA binding domain |
TRM |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_FVBNJ_P0022424 |
TRM |
PF02005 |
8.3e-38 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Trmt1l-002 |
MGP_FVBNJ_T0022423 |
1567 |
No protein |
- |
| - |
MGP_FVBNJ_T0022424 |
2249 |
561aa |
MGP_FVBNJ_P0022424"/note="transcript_id=MGP_FVBNJ_T0022424 |
| - |
MGP_FVBNJ_T0022425 |
3384 |
No protein |
- |
| - |
MGP_FVBNJ_T0022426 |
2347 |
No protein |
- |
| - |
MGP_FVBNJ_T0022427 |
1988 |
No protein |
- |
| - |
MGP_FVBNJ_T0022428 |
1527 |
No protein |
- |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0089253 | 20.362 | 11.6139 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 24.1071 | 13.75 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85 | 81.25 | mus_caroli | MGP_CAROLIEiJ_P0020327 | 65.3846 | 62.5 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0022598 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_aj | MGP_AJ_P0022571 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus_balbcj | MGP_BALBcJ_P0022539 | 65.522 | 62.9121 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0023054 | 65.522 | 62.9121 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_dba2j | MGP_DBA2J_P0022415 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_cbaj | MGP_CBAJ_P0022290 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_c3hhej | MGP_C3HHeJ_P0022351 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus_lpj | MGP_LPJ_P0022517 | 65.3425 | 62.7397 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 81.6071 | 79.6429 | mus_spretus | MGP_SPRETEiJ_P0021389 | 73.12 | 71.36 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0023089 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus | ENSMUSP00000068309 | 65.522 | 62.9121 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_pwkphj | MGP_PWKPhJ_P0021597 | 65.4795 | 62.8767 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.6071 | mus_pahari | MGP_PahariEiJ_P0075612 | 65.4795 | 62.6027 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.7857 | mus_spicilegus | ENSMSIP00000010524 | 65.6593 | 62.9121 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus_casteij | MGP_CASTEiJ_P0021879 | 65.522 | 62.9121 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.3571 | 81.9643 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0022392 | 65.6593 | 63.0494 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus_wsbeij | MGP_WSBEiJ_P0021917 | 65.522 | 62.9121 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 85.1786 | 81.7857 | mus_musculus_akrj | MGP_AKRJ_P0022538 | 65.3425 | 62.7397 |
| MGP_FVBNJ_G0016426 | mus_musculus_fvbnj | MGP_FVBNJ_P0022424 | 83.5714 | 79.4643 | rattus_norvegicus | ENSRNOP00000003517 | 66.6667 | 63.3903 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
