RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0035663 | Gene ID |
|
Accession |
- |
Symbol |
Dkc1 |
Alias |
- |
Full Name |
dyskeratosis congenita 1, dyskerin |
Status |
Confidence |
Length |
13885 bases |
Strand |
Plus strand |
Position |
X : 70613702 - 70627586 |
RNA binding domain |
PUA , TruB_N , DKCLD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0096366 |
PUA |
PF01472 |
2.6e-17 |
1 |
MGP_DBA2J_P0096366 |
TruB_N |
PF01509 |
3.5e-20 |
2 |
MGP_DBA2J_P0096366 |
DKCLD |
PF08068 |
1.3e-31 |
3 |
MGP_DBA2J_P0096367 |
TruB_N |
PF01509 |
9e-20 |
1 |
MGP_DBA2J_P0096367 |
DKCLD |
PF08068 |
1.7e-31 |
2 |
MGP_DBA2J_P0096371 |
TruB_N |
PF01509 |
3.1e-12 |
1 |
MGP_DBA2J_P0096371 |
DKCLD |
PF08068 |
1.1e-31 |
2 |
MGP_DBA2J_P0096368 |
DKCLD |
PF08068 |
5.7e-32 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Dkc1-001 |
MGP_DBA2J_T0096366 |
2804 |
509aa |
MGP_DBA2J_P0096366"/note="transcript_id=MGP_DBA2J_T0096366 |
- |
MGP_DBA2J_T0096367 |
839 |
260aa |
MGP_DBA2J_P0096367"/note="transcript_id=MGP_DBA2J_T0096367 |
- |
MGP_DBA2J_T0096368 |
462 |
145aa |
MGP_DBA2J_P0096368"/note="transcript_id=MGP_DBA2J_T0096368 |
- |
MGP_DBA2J_T0096369 |
898 |
No protein |
- |
- |
MGP_DBA2J_T0096370 |
541 |
No protein |
- |
- |
MGP_DBA2J_T0096371 |
754 |
184aa |
MGP_DBA2J_P0096371"/note="transcript_id=MGP_DBA2J_T0096371 |
- |
MGP_DBA2J_T0096372 |
592 |
No protein |
- |
- |
MGP_DBA2J_T0096373 |
963 |
No protein |
- |
- |
MGP_DBA2J_T0096374 |
657 |
74aa |
MGP_DBA2J_P0096374"/note="transcript_id=MGP_DBA2J_T0096374 |
- |
MGP_DBA2J_T0096375 |
668 |
No protein |
- |
- |
MGP_DBA2J_T0096376 |
551 |
No protein |
- |
- |
MGP_DBA2J_T0096377 |
610 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0035663 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 89.5874 | 88.6051 | mus_caroli | MGP_CAROLIEiJ_P0091970 | 95.7983 | 94.7479 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0096667 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0096764 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0096683 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0096233 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0096817 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0097189 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0096200 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 97.8389 | 97.2495 | mus_pahari | MGP_PahariEiJ_P0089598 | 97.456 | 96.8689 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus | ENSMUSP00000033776 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0096150 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0097541 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 91.1591 | 82.5147 | rattus_norvegicus | ENSRNOP00000074005 | 91.1591 | 82.5147 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0096388 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0095199 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 18.2711 | 18.2711 | mus_spicilegus | ENSMSIP00000002235 | 98.9362 | 98.9362 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 51.0806 | 51.0806 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0096162 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0096704 | 100 | 100 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 99.8035 | 99.6071 | mus_spretus | MGP_SPRETEiJ_P0095731 | 99.6078 | 99.4118 |
MGP_DBA2J_G0035663 | mus_musculus_dba2j | MGP_DBA2J_P0096366 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0096224 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |