Description

Ensembl ID MGP_DBA2J_G0033690 Gene ID Accession -
Symbol Farsa Alias - Full Name phenylalanyl-tRNA synthetase, alpha subunit
Status Confidence Length 12091 bases Strand Plus strand
Position 8 : 82041442 - 82053532 RNA binding domain PheRS_DBD1 , PheRS_DBD3 , tRNA-synt_2d
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_DBA2J_P0089460 PheRS_DBD1 PF18552 6.4e-23 1
MGP_DBA2J_P0089456 PheRS_DBD1 PF18552 6.1e-22 1
MGP_DBA2J_P0089456 PheRS_DBD3 PF18553 1.1e-19 2
MGP_DBA2J_P0089456 tRNA-synt_2d PF01409 3.5e-91 3
MGP_DBA2J_P0089459 PheRS_DBD1 PF18552 6.1e-22 1
MGP_DBA2J_P0089459 PheRS_DBD3 PF18553 1.1e-19 2
MGP_DBA2J_P0089459 tRNA-synt_2d PF01409 2e-91 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Farsa-001 MGP_DBA2J_T0089456 1826 508aa MGP_DBA2J_P0089456"/note="transcript_id=MGP_DBA2J_T0089456
- MGP_DBA2J_T0089457 1920 No protein -
- MGP_DBA2J_T0089458 3302 No protein -
- MGP_DBA2J_T0089459 1795 507aa MGP_DBA2J_P0089459"/note="transcript_id=MGP_DBA2J_T0089459
- MGP_DBA2J_T0089460 1708 105aa MGP_DBA2J_P0089460"/note="transcript_id=MGP_DBA2J_T0089460
- MGP_DBA2J_T0089461 730 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P003652931.92919.2905mus_musculus_dba2jMGP_DBA2J_P008945628.346517.126
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P009201924.115813.1833mus_musculus_dba2jMGP_DBA2J_P008945629.527616.1417

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945699.803199.2126mus_caroliMGP_CAROLIEiJ_P008530499.803199.2126
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945610099.8031mus_musculus_129s1svimjMGP_129S1SvImJ_P008973210099.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945610099.8031mus_musculus_ajMGP_AJ_P008981410099.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945610099.8031mus_musculus_balbcjMGP_BALBcJ_P008974910099.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_musculus_c3hhejMGP_C3HHeJ_P0089318100100
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_musculus_casteijMGP_CASTEiJ_P0089867100100
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945699.803199.8031mus_musculus_c57bl6njMGP_C57BL6NJ_P009027199.803199.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_musculus_fvbnjMGP_FVBNJ_P0089302100100
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945699.212698.622mus_pahariMGP_PahariEiJ_P005357199.212698.622
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945699.803199.8031mus_musculusENSMUSP0000000390699.803199.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_musculus_cbajMGP_CBAJ_P0089251100100
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945699.803199.8031mus_musculus_nzohlltjMGP_NZOHlLtJ_P009057499.803199.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945692.322891.7323rattus_norvegicusENSRNOP0000007665588.323987.7589
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945610099.8031mus_musculus_lpjMGP_LPJ_P008949110099.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945610099.8031mus_musculus_wsbeijMGP_WSBEiJ_P008836410099.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945699.803199.6063mus_spicilegusENSMSIP0000001635999.803199.6063
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0089323100100
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P008945610099.8031mus_musculus_akrjMGP_AKRJ_P008975310099.8031
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_spretusMGP_SPRETEiJ_P0088805100100
MGP_DBA2J_G0033690mus_musculus_dba2jMGP_DBA2J_P0089456100100mus_musculus_pwkphjMGP_PWKPhJ_P0089292100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression