RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0029036 | Gene ID |
|
Accession |
- |
Symbol |
Ssu72 |
Alias |
- |
Full Name |
Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) |
Status |
Confidence |
Length |
29627 bases |
Strand |
Plus strand |
Position |
4 : 153342478 - 153372104 |
RNA binding domain |
Ssu72 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0069533 |
Ssu72 |
PF04722 |
1.3e-91 |
1 |
MGP_DBA2J_P0069535 |
Ssu72 |
PF04722 |
5.3e-81 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Ssu72-001 |
MGP_DBA2J_T0069533 |
1471 |
194aa |
MGP_DBA2J_P0069533"/note="transcript_id=MGP_DBA2J_T0069533 |
- |
MGP_DBA2J_T0069534 |
1539 |
No protein |
- |
- |
MGP_DBA2J_T0069535 |
874 |
182aa |
MGP_DBA2J_P0069535"/note="transcript_id=MGP_DBA2J_T0069535 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0029036 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 99.4845 | 99.4845 | mus_caroli | MGP_CAROLIEiJ_P0066333 | 99.4845 | 99.4845 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0069815 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0069881 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0069801 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0069459 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0069973 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0070286 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0069442 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 99.4845 | 99.4845 | mus_pahari | MGP_PahariEiJ_P0081436 | 99.4845 | 99.4845 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus | ENSMUSP00000030905 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0069396 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0070479 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 99.4845 | 99.4845 | rattus_norvegicus | ENSRNOP00000024349 | 99.4845 | 99.4845 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0069615 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0068621 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 99.4845 | 99.4845 | mus_spicilegus | ENSMSIP00000017328 | 99.4845 | 99.4845 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0069461 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0069789 | 100 | 100 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 99.4845 | 99.4845 | mus_spretus | MGP_SPRETEiJ_P0068921 | 99.4845 | 99.4845 |
MGP_DBA2J_G0029036 | mus_musculus_dba2j | MGP_DBA2J_P0069533 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0069446 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |