RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0028152 | Gene ID |
|
Accession |
- |
Symbol |
Ptbp3 |
Alias |
- |
Full Name |
polypyrimidine tract binding protein 3 |
Status |
Confidence |
Length |
76441 bases |
Strand |
Minus strand |
Position |
4 : 56033348 - 56109788 |
RNA binding domain |
RRM_5 , RRM_8 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0065626 |
RRM_5 |
PF13893 |
1.9e-64 |
1 |
MGP_DBA2J_P0065626 |
RRM_5 |
PF13893 |
1.9e-64 |
2 |
MGP_DBA2J_P0065626 |
RRM_5 |
PF13893 |
1.9e-64 |
3 |
MGP_DBA2J_P0065626 |
RRM_8 |
PF11835 |
6.6e-15 |
4 |
MGP_DBA2J_P0065626 |
RRM_1 |
PF00076 |
4.6e-30 |
5 |
MGP_DBA2J_P0065626 |
RRM_1 |
PF00076 |
4.6e-30 |
6 |
MGP_DBA2J_P0065626 |
RRM_1 |
PF00076 |
4.6e-30 |
7 |
MGP_DBA2J_P0065625 |
RRM_5 |
PF13893 |
2e-64 |
1 |
MGP_DBA2J_P0065625 |
RRM_5 |
PF13893 |
2e-64 |
2 |
MGP_DBA2J_P0065625 |
RRM_5 |
PF13893 |
2e-64 |
3 |
MGP_DBA2J_P0065625 |
RRM_8 |
PF11835 |
6.7e-15 |
4 |
MGP_DBA2J_P0065625 |
RRM_1 |
PF00076 |
4.8e-30 |
5 |
MGP_DBA2J_P0065625 |
RRM_1 |
PF00076 |
4.8e-30 |
6 |
MGP_DBA2J_P0065625 |
RRM_1 |
PF00076 |
4.8e-30 |
7 |
MGP_DBA2J_P0065628 |
RRM_5 |
PF13893 |
7e-50 |
1 |
MGP_DBA2J_P0065628 |
RRM_1 |
PF00076 |
1.6e-07 |
2 |
MGP_DBA2J_P0065631 |
RRM_5 |
PF13893 |
2.1e-06 |
1 |
MGP_DBA2J_P0065631 |
RRM_8 |
PF11835 |
1e-15 |
2 |
MGP_DBA2J_P0065631 |
RRM_1 |
PF00076 |
2e-11 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Ptbp3-001 |
MGP_DBA2J_T0065625 |
6677 |
554aa |
MGP_DBA2J_P0065625"/note="transcript_id=MGP_DBA2J_T0065625 |
- |
MGP_DBA2J_T0065626 |
3409 |
551aa |
MGP_DBA2J_P0065626"/note="transcript_id=MGP_DBA2J_T0065626 |
- |
MGP_DBA2J_T0065627 |
669 |
No protein |
- |
- |
MGP_DBA2J_T0065628 |
566 |
188aa |
MGP_DBA2J_P0065628"/note="transcript_id=MGP_DBA2J_T0065628 |
- |
MGP_DBA2J_T0065629 |
1286 |
45aa |
MGP_DBA2J_P0065629"/note="transcript_id=MGP_DBA2J_T0065629 |
- |
MGP_DBA2J_T0065630 |
558 |
41aa |
MGP_DBA2J_P0065630"/note="transcript_id=MGP_DBA2J_T0065630 |
- |
MGP_DBA2J_T0065631 |
550 |
146aa |
MGP_DBA2J_P0065631"/note="transcript_id=MGP_DBA2J_T0065631 |
- |
MGP_DBA2J_T0065632 |
447 |
No protein |
- |
- |
MGP_DBA2J_T0065633 |
606 |
104aa |
MGP_DBA2J_P0065633"/note="transcript_id=MGP_DBA2J_T0065633 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0025887 | 87.7477 | 78.5586 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 87.9061 | 78.7004 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 86.0902 | 71.8045 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 82.6715 | 68.9531 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0048361 | 38.5787 | 22.335 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 41.1552 | 23.8267 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0082413 | 37.785 | 21.4984 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 41.8773 | 23.8267 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0051865 | 15.8465 | 9.34112 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 34.296 | 20.2166 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 99.8195 | 99.8195 | mus_caroli | MGP_CAROLIEiJ_P0062540 | 99.8195 | 99.8195 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0065892 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0065945 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0065871 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0065542 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0065875 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 99.639 | 99.639 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0066346 | 99.2806 | 99.2806 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0065551 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 99.639 | mus_pahari | MGP_PahariEiJ_P0077676 | 100 | 99.639 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus | ENSMUSP00000133612 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0065490 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0066520 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 97.2924 | 96.3899 | rattus_norvegicus | ENSRNOP00000069354 | 99.6303 | 98.7061 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0065726 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0064746 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 99.639 | 99.639 | mus_spicilegus | ENSMSIP00000024149 | 99.2806 | 99.2806 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0065533 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0065835 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0065013 | 100 | 100 |
MGP_DBA2J_G0028152 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0065427 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |