RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0027643 | Gene ID |
|
Accession |
- |
Symbol |
Ptbp2 |
Alias |
- |
Full Name |
polypyrimidine tract binding protein 2 |
Status |
Confidence |
Length |
65803 bases |
Strand |
Minus strand |
Position |
3 : 116985783 - 117051585 |
RNA binding domain |
RRM_5 , RRM_8 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0063163 |
RRM_5 |
PF13893 |
1.7e-55 |
1 |
MGP_DBA2J_P0063163 |
RRM_5 |
PF13893 |
1.7e-55 |
2 |
MGP_DBA2J_P0063163 |
RRM_5 |
PF13893 |
1.7e-55 |
3 |
MGP_DBA2J_P0063163 |
RRM_8 |
PF11835 |
1.4e-15 |
4 |
MGP_DBA2J_P0063163 |
RRM_1 |
PF00076 |
2.3e-31 |
5 |
MGP_DBA2J_P0063163 |
RRM_1 |
PF00076 |
2.3e-31 |
6 |
MGP_DBA2J_P0063163 |
RRM_1 |
PF00076 |
2.3e-31 |
7 |
MGP_DBA2J_P0063164 |
RRM_5 |
PF13893 |
2.2e-54 |
1 |
MGP_DBA2J_P0063164 |
RRM_5 |
PF13893 |
2.2e-54 |
2 |
MGP_DBA2J_P0063164 |
RRM_8 |
PF11835 |
1.4e-15 |
3 |
MGP_DBA2J_P0063164 |
RRM_1 |
PF00076 |
1e-31 |
4 |
MGP_DBA2J_P0063164 |
RRM_1 |
PF00076 |
1e-31 |
5 |
MGP_DBA2J_P0063164 |
RRM_1 |
PF00076 |
1e-31 |
6 |
MGP_DBA2J_P0063169 |
RRM_5 |
PF13893 |
1.4e-21 |
1 |
MGP_DBA2J_P0063165 |
RRM_5 |
PF13893 |
3.3e-11 |
1 |
MGP_DBA2J_P0063165 |
RRM_8 |
PF11835 |
2.3e-15 |
2 |
MGP_DBA2J_P0063165 |
RRM_1 |
PF00076 |
1.3e-12 |
3 |
MGP_DBA2J_P0063171 |
RRM_8 |
PF11835 |
1.4e-08 |
1 |
MGP_DBA2J_P0063171 |
RRM_1 |
PF00076 |
5.3e-10 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Ptbp2-001 |
MGP_DBA2J_T0063163 |
3365 |
532aa |
MGP_DBA2J_P0063163"/note="transcript_id=MGP_DBA2J_T0063163 |
- |
MGP_DBA2J_T0063164 |
3774 |
531aa |
MGP_DBA2J_P0063164"/note="transcript_id=MGP_DBA2J_T0063164 |
- |
MGP_DBA2J_T0063165 |
1598 |
356aa |
MGP_DBA2J_P0063165"/note="transcript_id=MGP_DBA2J_T0063165 |
- |
MGP_DBA2J_T0063166 |
576 |
33aa |
MGP_DBA2J_P0063166"/note="transcript_id=MGP_DBA2J_T0063166 |
- |
MGP_DBA2J_T0063167 |
937 |
No protein |
- |
- |
MGP_DBA2J_T0063168 |
491 |
No protein |
- |
- |
MGP_DBA2J_T0063169 |
465 |
155aa |
MGP_DBA2J_P0063169"/note="transcript_id=MGP_DBA2J_T0063169 |
- |
MGP_DBA2J_T0063170 |
4047 |
No protein |
- |
- |
MGP_DBA2J_T0063171 |
1742 |
241aa |
MGP_DBA2J_P0063171"/note="transcript_id=MGP_DBA2J_T0063171 |
- |
MGP_DBA2J_T0063172 |
654 |
No protein |
- |
- |
MGP_DBA2J_T0063173 |
478 |
No protein |
- |
- |
MGP_DBA2J_T0063174 |
454 |
No protein |
- |
- |
MGP_DBA2J_T0063175 |
389 |
49aa |
MGP_DBA2J_P0063175"/note="transcript_id=MGP_DBA2J_T0063175 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0065625 | 82.6715 | 68.9531 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 86.0902 | 71.8045 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0025887 | 82.5225 | 70.8108 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 86.0902 | 73.8722 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0048361 | 38.9171 | 23.181 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 43.2331 | 25.7519 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0082413 | 36.645 | 21.4984 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 42.2932 | 24.812 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0051865 | 15.0959 | 8.8407 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 34.0226 | 19.9248 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 99.812 | mus_caroli | MGP_CAROLIEiJ_P0060199 | 100 | 99.812 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0063453 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0063477 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0063403 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0063090 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 97.9323 | 97.9323 | mus_musculus_casteij | MGP_CASTEiJ_P0063390 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0063893 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0063127 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0071135 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus | ENSMUSP00000029780 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0063052 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0064109 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 96.8045 | 96.0526 | rattus_norvegicus | ENSRNOP00000015036 | 96.6229 | 95.8724 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0063306 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0062354 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_spicilegus | ENSMSIP00000020820 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0063121 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0063411 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0062591 | 100 | 100 |
MGP_DBA2J_G0027643 | mus_musculus_dba2j | MGP_DBA2J_P0063163 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0062935 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |