Description

Ensembl ID MGP_DBA2J_G0023881 Gene ID Accession -
Symbol Hnrnpll Alias - Full Name heterogeneous nuclear ribonucleoprotein L-like
Status Confidence Length 33343 bases Strand Minus strand
Position 17 : 78891230 - 78924572 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_DBA2J_P0048361 RRM_5 PF13893 9.1e-48 1
MGP_DBA2J_P0048361 RRM_5 PF13893 9.1e-48 2
MGP_DBA2J_P0048361 RRM_8 PF11835 5.6e-12 3
MGP_DBA2J_P0048361 RRM_1 PF00076 2.9e-21 4
MGP_DBA2J_P0048361 RRM_1 PF00076 2.9e-21 5
MGP_DBA2J_P0048362 RRM_5 PF13893 9.1e-48 1
MGP_DBA2J_P0048362 RRM_5 PF13893 9.1e-48 2
MGP_DBA2J_P0048362 RRM_8 PF11835 5.6e-12 3
MGP_DBA2J_P0048362 RRM_1 PF00076 2.9e-21 4
MGP_DBA2J_P0048362 RRM_1 PF00076 2.9e-21 5
MGP_DBA2J_P0048363 RRM_8 PF11835 3.3e-12 1
MGP_DBA2J_P0048363 RRM_1 PF00076 8.2e-15 2
MGP_DBA2J_P0048363 RRM_1 PF00076 8.2e-15 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Hnrnpll-001 MGP_DBA2J_T0048361 3116 591aa MGP_DBA2J_P0048361"/note="transcript_id=MGP_DBA2J_T0048361
- MGP_DBA2J_T0048362 3009 591aa MGP_DBA2J_P0048362"/note="transcript_id=MGP_DBA2J_T0048362
- MGP_DBA2J_T0048363 2742 331aa MGP_DBA2J_P0048363"/note="transcript_id=MGP_DBA2J_T0048363
- MGP_DBA2J_T0048364 1868 No protein -
- MGP_DBA2J_T0048365 2765 No protein -
- MGP_DBA2J_T0048366 4651 No protein -
- MGP_DBA2J_T0048367 3019 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P008241362.540750.3257mus_musculus_dba2jMGP_DBA2J_P004836164.974652.2843
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P006562541.155223.8267mus_musculus_dba2jMGP_DBA2J_P004836138.578722.335
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P006316343.233125.7519mus_musculus_dba2jMGP_DBA2J_P004836138.917123.181
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P002588742.882925.4054mus_musculus_dba2jMGP_DBA2J_P004836140.270723.8579
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P005186516.01339.25772mus_musculus_dba2jMGP_DBA2J_P004836132.487318.7817

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836199.661699.154mus_caroliMGP_CAROLIEiJ_P004569697.840597.3422
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0048649100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836199.830899.6616mus_musculus_ajMGP_AJ_P004862799.159798.9916
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_balbcjMGP_BALBcJ_P0048588100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_c3hhejMGP_C3HHeJ_P0048334100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836199.830899.6616mus_musculus_casteijMGP_CASTEiJ_P004840599.326699.1582
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0049082100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_fvbnjMGP_FVBNJ_P0048327100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836199.661699.154mus_pahariMGP_PahariEiJ_P004521098.49597.9933
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculusENSMUSP00000058308100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_cbajMGP_CBAJ_P0048257100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836110099.8308mus_musculus_nzohlltjMGP_NZOHlLtJ_P004917899.494999.3266
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836198.30897.9695rattus_norvegicusENSRNOP0000000917598.30897.9695
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_lpjMGP_LPJ_P0048474100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836110099.8308mus_musculus_wsbeijMGP_WSBEiJ_P004763799.494999.3266
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836110099.8308mus_spicilegusENSMSIP0000000866598.664498.4975
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P0048361100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0048332100100
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836110099.8308mus_musculus_akrjMGP_AKRJ_P004858899.494999.3266
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836199.661699.4924mus_spretusMGP_SPRETEiJ_P004760799.325599.1568
MGP_DBA2J_G0023881mus_musculus_dba2jMGP_DBA2J_P004836110099.8308mus_musculus_pwkphjMGP_PWKPhJ_P004799899.494999.3266

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression