Description

Ensembl ID MGP_DBA2J_G0023486 Gene ID Accession -
Symbol Dhx16 Alias - Full Name DEAH (Asp-Glu-Ala-His) box polypeptide 16
Status Confidence Length 13912 bases Strand Plus strand
Position 17 : 34266619 - 34280530 RNA binding domain DEAD , HA2 , OB_NTP_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_DBA2J_P0047218 DEAD PF00270 7.8e-07 1
MGP_DBA2J_P0047218 HA2 PF04408 6.3e-19 2
MGP_DBA2J_P0047218 OB_NTP_bind PF07717 4e-19 3
MGP_DBA2J_P0047219 DEAD PF00270 7.9e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Dhx16-001 MGP_DBA2J_T0047218 3351 1044aa MGP_DBA2J_P0047218"/note="transcript_id=MGP_DBA2J_T0047218
- MGP_DBA2J_T0047219 3275 741aa MGP_DBA2J_P0047219"/note="transcript_id=MGP_DBA2J_T0047219
- MGP_DBA2J_T0047220 722 No protein -
- MGP_DBA2J_T0047221 566 No protein -
- MGP_DBA2J_T0047222 562 No protein -
- MGP_DBA2J_T0047223 462 No protein -
- MGP_DBA2J_T0047224 490 122aa MGP_DBA2J_P0047224"/note="transcript_id=MGP_DBA2J_T0047224
- MGP_DBA2J_T0047225 491 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P003795430.256418.0952mus_musculus_dba2jMGP_DBA2J_P004721839.559423.659
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P008697450.732429.6937mus_musculus_dba2jMGP_DBA2J_P004721836.494321.3602
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004837631.685419.3258mus_musculus_dba2jMGP_DBA2J_P004721840.517224.7126
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P003019461.747944.2693mus_musculus_dba2jMGP_DBA2J_P004721841.283529.5977
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P003581125.885814.4613mus_musculus_dba2jMGP_DBA2J_P004721834.291219.1571
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P002249326.734115.896mus_musculus_dba2jMGP_DBA2J_P004721835.440621.0728
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P005868365.007145.8037mus_musculus_dba2jMGP_DBA2J_P004721843.773930.8429
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P007427338.608724.6957mus_musculus_dba2jMGP_DBA2J_P004721842.528727.2031
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P003239551.845936.7576mus_musculus_dba2jMGP_DBA2J_P004721861.877443.8697
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P007139063.647846.1635mus_musculus_dba2jMGP_DBA2J_P004721848.467435.1533
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P008148133.624520.524mus_musculus_dba2jMGP_DBA2J_P004721836.877422.5096
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004931826.228416.0554mus_musculus_dba2jMGP_DBA2J_P004721836.302722.2222
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P009453831.80719.215mus_musculus_dba2jMGP_DBA2J_P004721837.260522.5096
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P006073638.323mus_musculus_dba2jMGP_DBA2J_P004721836.685822.0307
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P009012647.149832.9805mus_musculus_dba2jMGP_DBA2J_P004721855.459838.7931
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P007800549.860731.0585mus_musculus_dba2jMGP_DBA2J_P004721834.291221.3602
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P003125555.840836.0719mus_musculus_dba2jMGP_DBA2J_P004721841.666726.9157
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P002702122.718812.0112mus_musculus_dba2jMGP_DBA2J_P004721823.371612.3563

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721893.007792.9119mus_caroliMGP_CAROLIEiJ_P004459199.589799.4872
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0047505100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_ajMGP_AJ_P0047486100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_balbcjMGP_BALBcJ_P0047442100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_c3hhejMGP_C3HHeJ_P0047181100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_casteijMGP_CASTEiJ_P0047251100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0047926100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721899.904299.9042mus_musculus_fvbnjMGP_FVBNJ_P004718099.904299.9042
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721899.712699.4253mus_pahariMGP_PahariEiJ_P004412699.712699.4253
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculusENSMUSP00000025292100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_cbajMGP_CBAJ_P0047117100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0048018100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721898.946498.4674rattus_norvegicusENSRNOP0000007221698.946498.4674
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721899.904299.9042mus_musculus_lpjMGP_LPJ_P004732699.904299.9042
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721899.904299.9042mus_musculus_wsbeijMGP_WSBEiJ_P004651499.904299.9042
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721899.904299.8084mus_spicilegusENSMSIP0000001783799.904299.8084
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721899.904299.9042mus_musculus_nodshiltjMGP_NODShiLtJ_P004717999.904299.9042
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P0047218100100mus_musculus_akrjMGP_AKRJ_P0047439100100
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721896.360296.3602mus_spretusMGP_SPRETEiJ_P004649499.702799.7027
MGP_DBA2J_G0023486mus_musculus_dba2jMGP_DBA2J_P004721810099.7126mus_musculus_pwkphjMGP_PWKPhJ_P004684510099.7126

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression