RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0023486 | Gene ID |
|
Accession |
- |
Symbol |
Dhx16 |
Alias |
- |
Full Name |
DEAH (Asp-Glu-Ala-His) box polypeptide 16 |
Status |
Confidence |
Length |
13912 bases |
Strand |
Plus strand |
Position |
17 : 34266619 - 34280530 |
RNA binding domain |
DEAD , HA2 , OB_NTP_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0047218 |
DEAD |
PF00270 |
7.8e-07 |
1 |
MGP_DBA2J_P0047218 |
HA2 |
PF04408 |
6.3e-19 |
2 |
MGP_DBA2J_P0047218 |
OB_NTP_bind |
PF07717 |
4e-19 |
3 |
MGP_DBA2J_P0047219 |
DEAD |
PF00270 |
7.9e-07 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Dhx16-001 |
MGP_DBA2J_T0047218 |
3351 |
1044aa |
MGP_DBA2J_P0047218"/note="transcript_id=MGP_DBA2J_T0047218 |
- |
MGP_DBA2J_T0047219 |
3275 |
741aa |
MGP_DBA2J_P0047219"/note="transcript_id=MGP_DBA2J_T0047219 |
- |
MGP_DBA2J_T0047220 |
722 |
No protein |
- |
- |
MGP_DBA2J_T0047221 |
566 |
No protein |
- |
- |
MGP_DBA2J_T0047222 |
562 |
No protein |
- |
- |
MGP_DBA2J_T0047223 |
462 |
No protein |
- |
- |
MGP_DBA2J_T0047224 |
490 |
122aa |
MGP_DBA2J_P0047224"/note="transcript_id=MGP_DBA2J_T0047224 |
- |
MGP_DBA2J_T0047225 |
491 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0037954 | 30.2564 | 18.0952 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 39.5594 | 23.659 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0086974 | 50.7324 | 29.6937 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 36.4943 | 21.3602 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0048376 | 31.6854 | 19.3258 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 40.5172 | 24.7126 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0030194 | 61.7479 | 44.2693 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 41.2835 | 29.5977 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 25.8858 | 14.4613 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 34.2912 | 19.1571 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0022493 | 26.7341 | 15.896 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 35.4406 | 21.0728 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0058683 | 65.0071 | 45.8037 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 43.7739 | 30.8429 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0074273 | 38.6087 | 24.6957 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 42.5287 | 27.2031 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0032395 | 51.8459 | 36.7576 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 61.8774 | 43.8697 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0071390 | 63.6478 | 46.1635 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 48.4674 | 35.1533 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0081481 | 33.6245 | 20.524 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 36.8774 | 22.5096 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0049318 | 26.2284 | 16.0554 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 36.3027 | 22.2222 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0094538 | 31.807 | 19.215 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 37.2605 | 22.5096 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0060736 | 38.3 | 23 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 36.6858 | 22.0307 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0090126 | 47.1498 | 32.9805 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 55.4598 | 38.7931 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0078005 | 49.8607 | 31.0585 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 34.2912 | 21.3602 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 55.8408 | 36.0719 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 41.6667 | 26.9157 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0027021 | 22.7188 | 12.0112 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 23.3716 | 12.3563 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 93.0077 | 92.9119 | mus_caroli | MGP_CAROLIEiJ_P0044591 | 99.5897 | 99.4872 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0047505 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0047486 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0047442 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0047181 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0047251 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0047926 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 99.9042 | 99.9042 | mus_musculus_fvbnj | MGP_FVBNJ_P0047180 | 99.9042 | 99.9042 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 99.7126 | 99.4253 | mus_pahari | MGP_PahariEiJ_P0044126 | 99.7126 | 99.4253 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus | ENSMUSP00000025292 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0047117 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0048018 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 98.9464 | 98.4674 | rattus_norvegicus | ENSRNOP00000072216 | 98.9464 | 98.4674 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 99.9042 | 99.9042 | mus_musculus_lpj | MGP_LPJ_P0047326 | 99.9042 | 99.9042 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 99.9042 | 99.9042 | mus_musculus_wsbeij | MGP_WSBEiJ_P0046514 | 99.9042 | 99.9042 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 99.9042 | 99.8084 | mus_spicilegus | ENSMSIP00000017837 | 99.9042 | 99.8084 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 99.9042 | 99.9042 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047179 | 99.9042 | 99.9042 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0047439 | 100 | 100 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 96.3602 | 96.3602 | mus_spretus | MGP_SPRETEiJ_P0046494 | 99.7027 | 99.7027 |
MGP_DBA2J_G0023486 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 100 | 99.7126 | mus_musculus_pwkphj | MGP_PWKPhJ_P0046845 | 100 | 99.7126 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |