RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_DBA2J_G0022586	Gene ID		Accession	-
Symbol	Rpl35a	Alias	-	Full Name	ribosomal protein L35A
Status	Confidence	Length	3725 bases	Strand	Plus strand
Position	16 : 29547099 - 29550823	RNA binding domain	Ribosomal_L35Ae
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
MGP_DBA2J_P0043928	Ribosomal_L35Ae	PF01247	2.7e-45	1
MGP_DBA2J_P0043929	Ribosomal_L35Ae	PF01247	2.7e-45	1
MGP_DBA2J_P0043932	Ribosomal_L35Ae	PF01247	2.7e-45	1
MGP_DBA2J_P0043933	Ribosomal_L35Ae	PF01247	2.7e-45	1
MGP_DBA2J_P0043934	Ribosomal_L35Ae	PF01247	2.7e-45	1

Showing 1 to 5 of 5 entries

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID
-	MGP_DBA2J_T0043929	510	110aa	MGP_DBA2J_P0043929"/note="transcript_id=MGP_DBA2J_T0043929
-	MGP_DBA2J_T0043930	2846	No protein	-
-	MGP_DBA2J_T0043931	796	No protein	-
-	MGP_DBA2J_T0043932	500	110aa	MGP_DBA2J_P0043932"/note="transcript_id=MGP_DBA2J_T0043932
-	MGP_DBA2J_T0043933	519	110aa	MGP_DBA2J_P0043933"/note="transcript_id=MGP_DBA2J_T0043933
-	MGP_DBA2J_T0043934	518	110aa	MGP_DBA2J_P0043934"/note="transcript_id=MGP_DBA2J_T0043934
Rpl35a-001	MGP_DBA2J_T0043928	491	110aa	MGP_DBA2J_P0043928"/note="transcript_id=MGP_DBA2J_T0043928

Showing 1 to 7 of 7 entries

Gene Model

Click here to download MGP_DBA2J_G0022586's gene model file

Protein-Protein Interaction (PPI)

Click here to download MGP_DBA2J_G0022586's PPI file

Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_caroli	MGP_CAROLIEiJ_P0041363	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_129s1svimj	MGP_129S1SvImJ_P0044174	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_aj	MGP_AJ_P0044148	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_balbcj	MGP_BALBcJ_P0044124	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_c3hhej	MGP_C3HHeJ_P0043866	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_casteij	MGP_CASTEiJ_P0043981	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_c57bl6nj	MGP_C57BL6NJ_P0044609	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus_fvbnj	MGP_FVBNJ_P0043890	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_pahari	MGP_PahariEiJ_P0028749	100	100
MGP_DBA2J_G0022586	mus_musculus_dba2j	MGP_DBA2J_P0043933	100	100	mus_musculus	ENSMUSP00000110728	100	100

Showing 1 to 10 of 23 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Orthologs