RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0022355 | Gene ID |
|
Accession |
- |
Symbol |
Rsl1d1 |
Alias |
- |
Full Name |
ribosomal L1 domain containing 1 |
Status |
Confidence |
Length |
10378 bases |
Strand |
Minus strand |
Position |
16 : 7612792 - 7623169 |
RNA binding domain |
Ribosomal_L1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0042945 |
Ribosomal_L1 |
PF00687 |
1e-52 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rsl1d1-001 |
MGP_DBA2J_T0042945 |
1945 |
452aa |
MGP_DBA2J_P0042945"/note="transcript_id=MGP_DBA2J_T0042945 |
- |
MGP_DBA2J_T0042946 |
769 |
No protein |
- |
- |
MGP_DBA2J_T0042947 |
764 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0081824 | 25.9398 | 17.6692 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 15.2655 | 10.3982 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0046248 | 20.7373 | 10.1382 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 9.95575 | 4.86726 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0058237 | 26.2222 | 16.8889 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 13.0531 | 8.40708 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0092721 | 23.6607 | 14.2857 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 11.7257 | 7.07965 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0053168 | 24.8227 | 17.0213 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 15.4867 | 10.6195 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0028756 | 16.3399 | 4.57516 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 5.53097 | 1.54867 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0043181 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0043151 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0043134 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042876 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 99.7788 | 99.3363 | mus_musculus_casteij | MGP_CASTEiJ_P0042977 | 99.7788 | 99.3363 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0043619 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0042898 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 94.9115 | 92.2566 | mus_pahari | MGP_PahariEiJ_P0027791 | 94.9115 | 92.2566 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus | ENSMUSP00000113431 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0042787 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0043661 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 64.1593 | 57.0796 | rattus_norvegicus | ENSRNOP00000042092 | 53.7037 | 47.7778 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 64.1593 | 57.0796 | rattus_norvegicus | ENSRNOP00000077646 | 53.7037 | 47.7778 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0043009 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0042261 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 99.115 | 98.6726 | mus_spicilegus | ENSMSIP00000009903 | 91.8033 | 91.3934 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0042881 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0043123 | 100 | 100 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 99.5575 | 98.8938 | mus_spretus | MGP_SPRETEiJ_P0042242 | 99.5575 | 98.8938 |
MGP_DBA2J_G0022355 | mus_musculus_dba2j | MGP_DBA2J_P0042945 | 99.5575 | 98.8938 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042561 | 99.5575 | 98.8938 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |