RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0022274 | Gene ID |
|
Accession |
- |
Symbol |
Gtsf1 |
Alias |
- |
Full Name |
gametocyte specific factor 1 |
Status |
Confidence |
Length |
20647 bases |
Strand |
Minus strand |
Position |
15 : 100764898 - 100785544 |
RNA binding domain |
zf-U11-48K |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0042632 |
zf-U11-48K |
PF05253 |
1.8e-20 |
1 |
MGP_DBA2J_P0042632 |
zf-U11-48K |
PF05253 |
1.8e-20 |
2 |
MGP_DBA2J_P0042631 |
zf-U11-48K |
PF05253 |
3.4e-20 |
1 |
MGP_DBA2J_P0042631 |
zf-U11-48K |
PF05253 |
3.4e-20 |
2 |
MGP_DBA2J_P0042624 |
zf-U11-48K |
PF05253 |
3.8e-20 |
1 |
MGP_DBA2J_P0042624 |
zf-U11-48K |
PF05253 |
3.8e-20 |
2 |
MGP_DBA2J_P0042626 |
zf-U11-48K |
PF05253 |
3.8e-20 |
1 |
MGP_DBA2J_P0042626 |
zf-U11-48K |
PF05253 |
3.8e-20 |
2 |
MGP_DBA2J_P0042628 |
zf-U11-48K |
PF05253 |
3.8e-20 |
1 |
MGP_DBA2J_P0042628 |
zf-U11-48K |
PF05253 |
3.8e-20 |
2 |
MGP_DBA2J_P0042629 |
zf-U11-48K |
PF05253 |
3.8e-20 |
1 |
MGP_DBA2J_P0042629 |
zf-U11-48K |
PF05253 |
3.8e-20 |
2 |
MGP_DBA2J_P0042630 |
zf-U11-48K |
PF05253 |
3.8e-20 |
1 |
MGP_DBA2J_P0042630 |
zf-U11-48K |
PF05253 |
3.8e-20 |
2 |
MGP_DBA2J_P0042625 |
zf-U11-48K |
PF05253 |
5.3e-20 |
1 |
MGP_DBA2J_P0042625 |
zf-U11-48K |
PF05253 |
5.3e-20 |
2 |
MGP_DBA2J_P0042627 |
zf-U11-48K |
PF05253 |
5.7e-20 |
1 |
MGP_DBA2J_P0042627 |
zf-U11-48K |
PF05253 |
5.7e-20 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Gtsf1-001 |
MGP_DBA2J_T0042624 |
817 |
167aa |
MGP_DBA2J_P0042624"/note="transcript_id=MGP_DBA2J_T0042624 |
- |
MGP_DBA2J_T0042625 |
747 |
186aa |
MGP_DBA2J_P0042625"/note="transcript_id=MGP_DBA2J_T0042625 |
- |
MGP_DBA2J_T0042626 |
767 |
167aa |
MGP_DBA2J_P0042626"/note="transcript_id=MGP_DBA2J_T0042626 |
- |
MGP_DBA2J_T0042627 |
698 |
193aa |
MGP_DBA2J_P0042627"/note="transcript_id=MGP_DBA2J_T0042627 |
- |
MGP_DBA2J_T0042628 |
799 |
167aa |
MGP_DBA2J_P0042628"/note="transcript_id=MGP_DBA2J_T0042628 |
- |
MGP_DBA2J_T0042629 |
756 |
167aa |
MGP_DBA2J_P0042629"/note="transcript_id=MGP_DBA2J_T0042629 |
- |
MGP_DBA2J_T0042630 |
700 |
167aa |
MGP_DBA2J_P0042630"/note="transcript_id=MGP_DBA2J_T0042630 |
- |
MGP_DBA2J_T0042631 |
704 |
161aa |
MGP_DBA2J_P0042631"/note="transcript_id=MGP_DBA2J_T0042631 |
- |
MGP_DBA2J_T0042632 |
615 |
127aa |
MGP_DBA2J_P0042632"/note="transcript_id=MGP_DBA2J_T0042632 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0058769 | 46.3576 | 25.8278 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 36.2694 | 20.2073 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042633 | 42.8571 | 25.974 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 34.1969 | 20.7254 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0036554 | 20.4748 | 10.6825 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 35.7513 | 18.6528 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0040087 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0042870 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0042835 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0042824 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042559 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0042659 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0043307 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0042587 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 97.9275 | 97.4093 | mus_pahari | MGP_PahariEiJ_P0043435 | 99.4737 | 98.9474 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus | ENSMUSP00000115670 | 99.4845 | 99.4845 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0042471 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0043347 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 83.4197 | 82.3834 | rattus_norvegicus | ENSRNOP00000095019 | 91.4773 | 90.3409 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0042698 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0041947 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 93.2643 | 92.228 | mus_spicilegus | ENSMSIP00000012755 | 96.7742 | 95.6989 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0042569 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0042801 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0041926 | 100 | 100 |
MGP_DBA2J_G0022274 | mus_musculus_dba2j | MGP_DBA2J_P0042627 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042243 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |