Description

Ensembl ID MGP_DBA2J_G0022274 Gene ID Accession -
Symbol Gtsf1 Alias - Full Name gametocyte specific factor 1
Status Confidence Length 20647 bases Strand Minus strand
Position 15 : 100764898 - 100785544 RNA binding domain zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_DBA2J_P0042632 zf-U11-48K PF05253 1.8e-20 1
MGP_DBA2J_P0042632 zf-U11-48K PF05253 1.8e-20 2
MGP_DBA2J_P0042631 zf-U11-48K PF05253 3.4e-20 1
MGP_DBA2J_P0042631 zf-U11-48K PF05253 3.4e-20 2
MGP_DBA2J_P0042624 zf-U11-48K PF05253 3.8e-20 1
MGP_DBA2J_P0042624 zf-U11-48K PF05253 3.8e-20 2
MGP_DBA2J_P0042626 zf-U11-48K PF05253 3.8e-20 1
MGP_DBA2J_P0042626 zf-U11-48K PF05253 3.8e-20 2
MGP_DBA2J_P0042628 zf-U11-48K PF05253 3.8e-20 1
MGP_DBA2J_P0042628 zf-U11-48K PF05253 3.8e-20 2
MGP_DBA2J_P0042629 zf-U11-48K PF05253 3.8e-20 1
MGP_DBA2J_P0042629 zf-U11-48K PF05253 3.8e-20 2
MGP_DBA2J_P0042630 zf-U11-48K PF05253 3.8e-20 1
MGP_DBA2J_P0042630 zf-U11-48K PF05253 3.8e-20 2
MGP_DBA2J_P0042625 zf-U11-48K PF05253 5.3e-20 1
MGP_DBA2J_P0042625 zf-U11-48K PF05253 5.3e-20 2
MGP_DBA2J_P0042627 zf-U11-48K PF05253 5.7e-20 1
MGP_DBA2J_P0042627 zf-U11-48K PF05253 5.7e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Gtsf1-001 MGP_DBA2J_T0042624 817 167aa MGP_DBA2J_P0042624"/note="transcript_id=MGP_DBA2J_T0042624
- MGP_DBA2J_T0042625 747 186aa MGP_DBA2J_P0042625"/note="transcript_id=MGP_DBA2J_T0042625
- MGP_DBA2J_T0042626 767 167aa MGP_DBA2J_P0042626"/note="transcript_id=MGP_DBA2J_T0042626
- MGP_DBA2J_T0042627 698 193aa MGP_DBA2J_P0042627"/note="transcript_id=MGP_DBA2J_T0042627
- MGP_DBA2J_T0042628 799 167aa MGP_DBA2J_P0042628"/note="transcript_id=MGP_DBA2J_T0042628
- MGP_DBA2J_T0042629 756 167aa MGP_DBA2J_P0042629"/note="transcript_id=MGP_DBA2J_T0042629
- MGP_DBA2J_T0042630 700 167aa MGP_DBA2J_P0042630"/note="transcript_id=MGP_DBA2J_T0042630
- MGP_DBA2J_T0042631 704 161aa MGP_DBA2J_P0042631"/note="transcript_id=MGP_DBA2J_T0042631
- MGP_DBA2J_T0042632 615 127aa MGP_DBA2J_P0042632"/note="transcript_id=MGP_DBA2J_T0042632

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P005876946.357625.8278mus_musculus_dba2jMGP_DBA2J_P004262736.269420.2073
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P004263342.857125.974mus_musculus_dba2jMGP_DBA2J_P004262734.196920.7254
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P003655420.474810.6825mus_musculus_dba2jMGP_DBA2J_P004262735.751318.6528

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_caroliMGP_CAROLIEiJ_P0040087100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0042870100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_ajMGP_AJ_P0042835100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_balbcjMGP_BALBcJ_P0042824100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_casteijMGP_CASTEiJ_P0042659100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0043307100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_fvbnjMGP_FVBNJ_P0042587100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P004262797.927597.4093mus_pahariMGP_PahariEiJ_P004343599.473798.9474
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculusENSMUSP0000011567099.484599.4845
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_cbajMGP_CBAJ_P0042471100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0043347100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P004262783.419782.3834rattus_norvegicusENSRNOP0000009501991.477390.3409
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_lpjMGP_LPJ_P0042698100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_wsbeijMGP_WSBEiJ_P0041947100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P004262793.264392.228mus_spicilegusENSMSIP0000001275596.774295.6989
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0042569100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_akrjMGP_AKRJ_P0042801100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_spretusMGP_SPRETEiJ_P0041926100100
MGP_DBA2J_G0022274mus_musculus_dba2jMGP_DBA2J_P0042627100100mus_musculus_pwkphjMGP_PWKPhJ_P0042243100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression