Description

Ensembl ID MGP_DBA2J_G0019973 Gene ID Accession -
Symbol Tdrd9 Alias - Full Name tudor domain containing 9
Status Confidence Length 95197 bases Strand Plus strand
Position 12 : 109479965 - 109575161 RNA binding domain DEAD , HA2 , TUDOR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_DBA2J_P0035811 DEAD PF00270 1.3e-07 1
MGP_DBA2J_P0035811 HA2 PF04408 1.9e-12 2
MGP_DBA2J_P0035811 TUDOR PF00567 2e-14 3
MGP_DBA2J_P0035812 DEAD PF00270 1.6e-05 1
MGP_DBA2J_P0035812 HA2 PF04408 1.7e-12 2
MGP_DBA2J_P0035812 TUDOR PF00567 2.7e-14 3
MGP_DBA2J_P0035819 HA2 PF04408 3.2e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tdrd9-001 MGP_DBA2J_T0035811 4813 1383aa MGP_DBA2J_P0035811"/note="transcript_id=MGP_DBA2J_T0035811
- MGP_DBA2J_T0035812 3984 1327aa MGP_DBA2J_P0035812"/note="transcript_id=MGP_DBA2J_T0035812
- MGP_DBA2J_T0035818 3681 216aa MGP_DBA2J_P0035818"/note="transcript_id=MGP_DBA2J_T0035818
- MGP_DBA2J_T0035819 3366 539aa MGP_DBA2J_P0035819"/note="transcript_id=MGP_DBA2J_T0035819
- MGP_DBA2J_T0035820 796 No protein -
- MGP_DBA2J_T0035821 456 No protein -
- MGP_DBA2J_T0035822 486 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003795430.915817.1429mus_musculus_dba2jMGP_DBA2J_P003581130.513416.9197
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P008697440.479420.9055mus_musculus_dba2jMGP_DBA2J_P003581121.981211.3521
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P004837631.835218.5019mus_musculus_dba2jMGP_DBA2J_P003581130.730317.8597
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003019445.845326.9341mus_musculus_dba2jMGP_DBA2J_P003581123.138113.5936
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P002249332.225420.8815mus_musculus_dba2jMGP_DBA2J_P003581132.248720.8966
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P005868344.381223.3286mus_musculus_dba2jMGP_DBA2J_P003581122.559711.8583
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P007427331.739117.0435mus_musculus_dba2jMGP_DBA2J_P003581126.391914.1721
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P004721834.291219.1571mus_musculus_dba2jMGP_DBA2J_P003581125.885814.4613
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003239528.330715.0883mus_musculus_dba2jMGP_DBA2J_P003581125.524213.5936
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P007139043.270423.7736mus_musculus_dba2jMGP_DBA2J_P003581124.873513.6659
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P008148135.545921.048mus_musculus_dba2jMGP_DBA2J_P003581129.428817.4259
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P004931832.941220.1384mus_musculus_dba2jMGP_DBA2J_P003581134.417921.0412
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P009453832.134118.3156mus_musculus_dba2jMGP_DBA2J_P003581128.416516.1967
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P006073639.122.6mus_musculus_dba2jMGP_DBA2J_P003581128.271916.3413
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P009012629.723115.6352mus_musculus_dba2jMGP_DBA2J_P003581126.391913.8829
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P007800538.997222.2841mus_musculus_dba2jMGP_DBA2J_P003581120.245811.5691
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003125543.260623.62mus_musculus_dba2jMGP_DBA2J_P003581124.367313.3044
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P002702119.366910.0559mus_musculus_dba2jMGP_DBA2J_P003581115.03987.80911

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.421598.5539mus_caroliMGP_CAROLIEiJ_P003344699.421598.5539
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculus_129s1svimjMGP_129S1SvImJ_P003606099.783199.7108
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.855499.7831mus_musculus_ajMGP_AJ_P003597799.855499.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculus_balbcjMGP_BALBcJ_P003598399.783199.7108
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.855499.7831mus_musculus_c3hhejMGP_C3HHeJ_P003575299.855499.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.927799.7831mus_musculus_casteijMGP_CASTEiJ_P003569099.927799.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculus_c57bl6njMGP_C57BL6NJ_P003646999.783199.7108
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.855499.7831mus_musculus_fvbnjMGP_FVBNJ_P003578899.855499.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581198.698597.6862mus_pahariMGP_PahariEiJ_P008356598.627297.6156
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculusENSMUSP0000007802299.783199.7108
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.855499.7831mus_musculus_cbajMGP_CBAJ_P003567099.855499.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.927799.9277mus_musculus_nzohlltjMGP_NZOHlLtJ_P003650299.927799.9277
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581198.33796.8185rattus_norvegicusENSRNOP0000007372898.265996.7486
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculus_lpjMGP_LPJ_P003594899.783199.7108
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.855499.7831mus_musculus_wsbeijMGP_WSBEiJ_P003519899.855499.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.710899.4215mus_spicilegusENSMSIP0000003446299.710899.4215
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculus_nodshiltjMGP_NODShiLtJ_P003579799.783199.7108
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.855499.7831mus_musculus_akrjMGP_AKRJ_P003595299.855499.7831
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.638599.4215mus_spretusMGP_SPRETEiJ_P003498899.638599.4215
MGP_DBA2J_G0019973mus_musculus_dba2jMGP_DBA2J_P003581199.783199.7108mus_musculus_pwkphjMGP_PWKPhJ_P003536399.783199.7108

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression