RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0019973 | Gene ID |
|
Accession |
- |
Symbol |
Tdrd9 |
Alias |
- |
Full Name |
tudor domain containing 9 |
Status |
Confidence |
Length |
95197 bases |
Strand |
Plus strand |
Position |
12 : 109479965 - 109575161 |
RNA binding domain |
DEAD , HA2 , TUDOR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0035811 |
DEAD |
PF00270 |
1.3e-07 |
1 |
MGP_DBA2J_P0035811 |
HA2 |
PF04408 |
1.9e-12 |
2 |
MGP_DBA2J_P0035811 |
TUDOR |
PF00567 |
2e-14 |
3 |
MGP_DBA2J_P0035812 |
DEAD |
PF00270 |
1.6e-05 |
1 |
MGP_DBA2J_P0035812 |
HA2 |
PF04408 |
1.7e-12 |
2 |
MGP_DBA2J_P0035812 |
TUDOR |
PF00567 |
2.7e-14 |
3 |
MGP_DBA2J_P0035819 |
HA2 |
PF04408 |
3.2e-13 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tdrd9-001 |
MGP_DBA2J_T0035811 |
4813 |
1383aa |
MGP_DBA2J_P0035811"/note="transcript_id=MGP_DBA2J_T0035811 |
- |
MGP_DBA2J_T0035812 |
3984 |
1327aa |
MGP_DBA2J_P0035812"/note="transcript_id=MGP_DBA2J_T0035812 |
- |
MGP_DBA2J_T0035818 |
3681 |
216aa |
MGP_DBA2J_P0035818"/note="transcript_id=MGP_DBA2J_T0035818 |
- |
MGP_DBA2J_T0035819 |
3366 |
539aa |
MGP_DBA2J_P0035819"/note="transcript_id=MGP_DBA2J_T0035819 |
- |
MGP_DBA2J_T0035820 |
796 |
No protein |
- |
- |
MGP_DBA2J_T0035821 |
456 |
No protein |
- |
- |
MGP_DBA2J_T0035822 |
486 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0037954 | 30.9158 | 17.1429 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 30.5134 | 16.9197 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0086974 | 40.4794 | 20.9055 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 21.9812 | 11.3521 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0048376 | 31.8352 | 18.5019 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 30.7303 | 17.8597 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0030194 | 45.8453 | 26.9341 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 23.1381 | 13.5936 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0022493 | 32.2254 | 20.8815 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 32.2487 | 20.8966 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0058683 | 44.3812 | 23.3286 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 22.5597 | 11.8583 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0074273 | 31.7391 | 17.0435 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 26.3919 | 14.1721 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 34.2912 | 19.1571 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 25.8858 | 14.4613 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0032395 | 28.3307 | 15.0883 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 25.5242 | 13.5936 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0071390 | 43.2704 | 23.7736 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 24.8735 | 13.6659 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0081481 | 35.5459 | 21.048 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 29.4288 | 17.4259 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0049318 | 32.9412 | 20.1384 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 34.4179 | 21.0412 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0094538 | 32.1341 | 18.3156 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 28.4165 | 16.1967 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0060736 | 39.1 | 22.6 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 28.2719 | 16.3413 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0090126 | 29.7231 | 15.6352 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 26.3919 | 13.8829 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0078005 | 38.9972 | 22.2841 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 20.2458 | 11.5691 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 43.2606 | 23.62 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 24.3673 | 13.3044 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0027021 | 19.3669 | 10.0559 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 15.0398 | 7.80911 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.4215 | 98.5539 | mus_caroli | MGP_CAROLIEiJ_P0033446 | 99.4215 | 98.5539 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0036060 | 99.7831 | 99.7108 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.8554 | 99.7831 | mus_musculus_aj | MGP_AJ_P0035977 | 99.8554 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus_balbcj | MGP_BALBcJ_P0035983 | 99.7831 | 99.7108 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.8554 | 99.7831 | mus_musculus_c3hhej | MGP_C3HHeJ_P0035752 | 99.8554 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.9277 | 99.7831 | mus_musculus_casteij | MGP_CASTEiJ_P0035690 | 99.9277 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0036469 | 99.7831 | 99.7108 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.8554 | 99.7831 | mus_musculus_fvbnj | MGP_FVBNJ_P0035788 | 99.8554 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 98.6985 | 97.6862 | mus_pahari | MGP_PahariEiJ_P0083565 | 98.6272 | 97.6156 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus | ENSMUSP00000078022 | 99.7831 | 99.7108 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.8554 | 99.7831 | mus_musculus_cbaj | MGP_CBAJ_P0035670 | 99.8554 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.9277 | 99.9277 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0036502 | 99.9277 | 99.9277 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 98.337 | 96.8185 | rattus_norvegicus | ENSRNOP00000073728 | 98.2659 | 96.7486 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus_lpj | MGP_LPJ_P0035948 | 99.7831 | 99.7108 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.8554 | 99.7831 | mus_musculus_wsbeij | MGP_WSBEiJ_P0035198 | 99.8554 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7108 | 99.4215 | mus_spicilegus | ENSMSIP00000034462 | 99.7108 | 99.4215 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0035797 | 99.7831 | 99.7108 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.8554 | 99.7831 | mus_musculus_akrj | MGP_AKRJ_P0035952 | 99.8554 | 99.7831 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.6385 | 99.4215 | mus_spretus | MGP_SPRETEiJ_P0034988 | 99.6385 | 99.4215 |
MGP_DBA2J_G0019973 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 99.7831 | 99.7108 | mus_musculus_pwkphj | MGP_PWKPhJ_P0035363 | 99.7831 | 99.7108 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |