RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_DBA2J_G0018728 | Gene ID |
|
Accession |
- |
Symbol |
Dhx40 |
Alias |
- |
Full Name |
DEAH (Asp-Glu-Ala-His) box polypeptide 40 |
Status |
Confidence |
Length |
38790 bases |
Strand |
Minus strand |
Position |
11 : 84517923 - 84556712 |
RNA binding domain |
DEAD , HA2 , DUF2075 , OB_NTP_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_DBA2J_P0031255 |
DEAD |
PF00270 |
7.1e-09 |
1 |
MGP_DBA2J_P0031255 |
HA2 |
PF04408 |
5.5e-14 |
2 |
MGP_DBA2J_P0031255 |
DUF2075 |
PF09848 |
0.00019 |
3 |
MGP_DBA2J_P0031255 |
OB_NTP_bind |
PF07717 |
1.7e-15 |
4 |
MGP_DBA2J_P0031256 |
HA2 |
PF04408 |
1.3e-14 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Dhx40-001 |
MGP_DBA2J_T0031255 |
3797 |
779aa |
MGP_DBA2J_P0031255"/note="transcript_id=MGP_DBA2J_T0031255 |
- |
MGP_DBA2J_T0031256 |
912 |
304aa |
MGP_DBA2J_P0031256"/note="transcript_id=MGP_DBA2J_T0031256 |
- |
MGP_DBA2J_T0031257 |
645 |
No protein |
- |
- |
MGP_DBA2J_T0031258 |
626 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0037954 | 25.1282 | 14.0659 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 44.0308 | 24.647 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0086974 | 48.8682 | 25.6991 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 47.1117 | 24.7754 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0048376 | 26.8165 | 14.9813 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 45.9564 | 25.6739 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0030194 | 53.1519 | 34.957 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 47.6252 | 31.3222 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0035811 | 24.3673 | 13.3044 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 43.2606 | 23.62 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0022493 | 22.9769 | 13.2225 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 40.8216 | 23.4917 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0058683 | 57.8947 | 35.8464 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 52.2465 | 32.3492 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0074273 | 33.3043 | 20.6957 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 49.1656 | 30.552 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0047218 | 41.6667 | 26.9157 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 55.8408 | 36.0719 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0032395 | 35.5538 | 23.9968 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 56.8678 | 38.3825 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0071390 | 51.5723 | 34.2138 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 52.6316 | 34.9166 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0081481 | 33.2751 | 19.1266 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 48.9089 | 28.113 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0049318 | 23.3218 | 12.9412 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 43.2606 | 24.0051 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0094538 | 27.3917 | 14.8814 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 43.0039 | 23.3633 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0060736 | 35.2 | 21.2 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 45.1861 | 27.2144 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0090126 | 36.8078 | 23.2085 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 58.0231 | 36.5854 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0078005 | 44.5682 | 25.9053 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 41.0783 | 23.8768 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0027021 | 15.9218 | 7.72812 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 21.9512 | 10.6547 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 99.8716 | mus_caroli | MGP_CAROLIEiJ_P0029015 | 100 | 99.8716 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0031475 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0031417 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0031406 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0031204 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0030960 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031928 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0031252 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 99.8716 | 99.4865 | mus_pahari | MGP_PahariEiJ_P0035734 | 99.8716 | 99.4865 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus | ENSMUSP00000018569 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0031118 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0031944 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 99.8716 | 99.1014 | rattus_norvegicus | ENSRNOP00000075131 | 100 | 99.2288 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0031380 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0030691 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 99.8716 | 99.8716 | mus_spicilegus | ENSMSIP00000010912 | 99.8716 | 99.8716 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0031235 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0031401 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0030426 | 100 | 100 |
MGP_DBA2J_G0018728 | mus_musculus_dba2j | MGP_DBA2J_P0031255 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0030683 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |