Description

Ensembl ID MGP_DBA2J_G0018728 Gene ID Accession -
Symbol Dhx40 Alias - Full Name DEAH (Asp-Glu-Ala-His) box polypeptide 40
Status Confidence Length 38790 bases Strand Minus strand
Position 11 : 84517923 - 84556712 RNA binding domain DEAD , HA2 , DUF2075 , OB_NTP_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_DBA2J_P0031255 DEAD PF00270 7.1e-09 1
MGP_DBA2J_P0031255 HA2 PF04408 5.5e-14 2
MGP_DBA2J_P0031255 DUF2075 PF09848 0.00019 3
MGP_DBA2J_P0031255 OB_NTP_bind PF07717 1.7e-15 4
MGP_DBA2J_P0031256 HA2 PF04408 1.3e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Dhx40-001 MGP_DBA2J_T0031255 3797 779aa MGP_DBA2J_P0031255"/note="transcript_id=MGP_DBA2J_T0031255
- MGP_DBA2J_T0031256 912 304aa MGP_DBA2J_P0031256"/note="transcript_id=MGP_DBA2J_T0031256
- MGP_DBA2J_T0031257 645 No protein -
- MGP_DBA2J_T0031258 626 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003795425.128214.0659mus_musculus_dba2jMGP_DBA2J_P003125544.030824.647
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P008697448.868225.6991mus_musculus_dba2jMGP_DBA2J_P003125547.111724.7754
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P004837626.816514.9813mus_musculus_dba2jMGP_DBA2J_P003125545.956425.6739
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003019453.151934.957mus_musculus_dba2jMGP_DBA2J_P003125547.625231.3222
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003581124.367313.3044mus_musculus_dba2jMGP_DBA2J_P003125543.260623.62
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P002249322.976913.2225mus_musculus_dba2jMGP_DBA2J_P003125540.821623.4917
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P005868357.894735.8464mus_musculus_dba2jMGP_DBA2J_P003125552.246532.3492
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P007427333.304320.6957mus_musculus_dba2jMGP_DBA2J_P003125549.165630.552
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P004721841.666726.9157mus_musculus_dba2jMGP_DBA2J_P003125555.840836.0719
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003239535.553823.9968mus_musculus_dba2jMGP_DBA2J_P003125556.867838.3825
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P007139051.572334.2138mus_musculus_dba2jMGP_DBA2J_P003125552.631634.9166
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P008148133.275119.1266mus_musculus_dba2jMGP_DBA2J_P003125548.908928.113
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P004931823.321812.9412mus_musculus_dba2jMGP_DBA2J_P003125543.260624.0051
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P009453827.391714.8814mus_musculus_dba2jMGP_DBA2J_P003125543.003923.3633
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P006073635.221.2mus_musculus_dba2jMGP_DBA2J_P003125545.186127.2144
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P009012636.807823.2085mus_musculus_dba2jMGP_DBA2J_P003125558.023136.5854
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P007800544.568225.9053mus_musculus_dba2jMGP_DBA2J_P003125541.078323.8768
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P002702115.92187.72812mus_musculus_dba2jMGP_DBA2J_P003125521.951210.6547

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003125510099.8716mus_caroliMGP_CAROLIEiJ_P002901510099.8716
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0031475100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_ajMGP_AJ_P0031417100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_balbcjMGP_BALBcJ_P0031406100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_c3hhejMGP_C3HHeJ_P0031204100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_casteijMGP_CASTEiJ_P0030960100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0031928100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_fvbnjMGP_FVBNJ_P0031252100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003125599.871699.4865mus_pahariMGP_PahariEiJ_P003573499.871699.4865
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculusENSMUSP00000018569100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_cbajMGP_CBAJ_P0031118100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0031944100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003125599.871699.1014rattus_norvegicusENSRNOP0000007513110099.2288
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_lpjMGP_LPJ_P0031380100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_wsbeijMGP_WSBEiJ_P0030691100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P003125599.871699.8716mus_spicilegusENSMSIP0000001091299.871699.8716
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0031235100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_akrjMGP_AKRJ_P0031401100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_spretusMGP_SPRETEiJ_P0030426100100
MGP_DBA2J_G0018728mus_musculus_dba2jMGP_DBA2J_P0031255100100mus_musculus_pwkphjMGP_PWKPhJ_P0030683100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression