Description

Ensembl ID MGP_CBAJ_G0033898 Gene ID Accession -
Symbol Rpl13 Alias - Full Name ribosomal protein L13
Status Confidence Length 6142 bases Strand Plus strand
Position 8 : 135719664 - 135725805 RNA binding domain Ribosomal_L13e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CBAJ_P0090367 Ribosomal_L13e PF01294 4.7e-119 1
MGP_CBAJ_P0090367 Ribosomal_L13e PF01294 4.7e-119 2
MGP_CBAJ_P0090366 Ribosomal_L13e PF01294 1.7e-82 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpl13-001 MGP_CBAJ_T0090366 780 211aa MGP_CBAJ_P0090366"/note="transcript_id=MGP_CBAJ_T0090366
- MGP_CBAJ_T0090367 935 295aa MGP_CBAJ_P0090367"/note="transcript_id=MGP_CBAJ_T0090367
- MGP_CBAJ_T0090368 713 No protein -
- MGP_CBAJ_T0090369 993 No protein -
- MGP_CBAJ_T0090370 1969 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P008733291.044889.0547mus_musculus_cbajMGP_CBAJ_P009036686.729984.8341

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036610099.5261mus_caroliMGP_CAROLIEiJ_P008641110099.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036646.445542.1801mus_musculus_129s1svimjMGP_129S1SvImJ_P009085861.2555.625
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculus_ajMGP_AJ_P0090938100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculus_lpjMGP_LPJ_P0090608100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036698.578298.5782mus_musculus_c57bl6njMGP_C57BL6NJ_P009138398.578298.5782
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculusENSMUSP00000000756100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036698.104397.6303rattus_norvegicusENSRNOP0000007967241.902841.7004
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036685.78283.8863rattus_norvegicusENSRNOP0000004801994.270892.1875
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036698.104397.6303rattus_norvegicusENSRNOP0000006335598.571498.0952
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036668.720466.3507rattus_norvegicusENSRNOP0000008637188.414685.3659
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036684.360278.673rattus_norvegicusENSRNOP0000008738876.394971.2446
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036610099.5261mus_musculus_pwkphjMGP_PWKPhJ_P009043110099.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036699.526199.5261mus_musculus_balbcjMGP_BALBcJ_P009086599.526199.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036649.76347.3934mus_pahariMGP_PahariEiJ_P005335689.743685.4701
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036610099.5261mus_pahariMGP_PahariEiJ_P005466110099.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculus_fvbnjMGP_FVBNJ_P0090414100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculus_dba2jMGP_DBA2J_P0090580100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0090442100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036610099.0521mus_spretusMGP_SPRETEiJ_P008993510099.0521
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036610099.5261mus_spicilegusENSMSIP0000001710310099.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036698.104398.1043mus_musculus_nzohlltjMGP_NZOHlLtJ_P009170298.104398.1043
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036610099.5261mus_musculus_casteijMGP_CASTEiJ_P009100010099.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P0090366100100mus_musculus_akrjMGP_AKRJ_P0090879100100
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036699.526199.5261mus_musculus_c3hhejMGP_C3HHeJ_P009043899.526199.5261
MGP_CBAJ_G0033898mus_musculus_cbajMGP_CBAJ_P009036636.01927.9621mus_musculus_wsbeijMGP_WSBEiJ_P00894764031.0526

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression