RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CBAJ_G0033898 | Gene ID |
|
Accession |
- |
Symbol |
Rpl13 |
Alias |
- |
Full Name |
ribosomal protein L13 |
Status |
Confidence |
Length |
6142 bases |
Strand |
Plus strand |
Position |
8 : 135719664 - 135725805 |
RNA binding domain |
Ribosomal_L13e |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CBAJ_P0090367 |
Ribosomal_L13e |
PF01294 |
4.7e-119 |
1 |
MGP_CBAJ_P0090367 |
Ribosomal_L13e |
PF01294 |
4.7e-119 |
2 |
MGP_CBAJ_P0090366 |
Ribosomal_L13e |
PF01294 |
1.7e-82 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rpl13-001 |
MGP_CBAJ_T0090366 |
780 |
211aa |
MGP_CBAJ_P0090366"/note="transcript_id=MGP_CBAJ_T0090366 |
- |
MGP_CBAJ_T0090367 |
935 |
295aa |
MGP_CBAJ_P0090367"/note="transcript_id=MGP_CBAJ_T0090367 |
- |
MGP_CBAJ_T0090368 |
713 |
No protein |
- |
- |
MGP_CBAJ_T0090369 |
993 |
No protein |
- |
- |
MGP_CBAJ_T0090370 |
1969 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0087332 | 91.0448 | 89.0547 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 86.7299 | 84.8341 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 99.5261 | mus_caroli | MGP_CAROLIEiJ_P0086411 | 100 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 46.4455 | 42.1801 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0090858 | 61.25 | 55.625 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0090938 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0090608 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 98.5782 | 98.5782 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091383 | 98.5782 | 98.5782 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus | ENSMUSP00000000756 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 98.1043 | 97.6303 | rattus_norvegicus | ENSRNOP00000079672 | 41.9028 | 41.7004 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 85.782 | 83.8863 | rattus_norvegicus | ENSRNOP00000048019 | 94.2708 | 92.1875 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 98.1043 | 97.6303 | rattus_norvegicus | ENSRNOP00000063355 | 98.5714 | 98.0952 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 68.7204 | 66.3507 | rattus_norvegicus | ENSRNOP00000086371 | 88.4146 | 85.3659 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 84.3602 | 78.673 | rattus_norvegicus | ENSRNOP00000087388 | 76.3949 | 71.2446 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 99.5261 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090431 | 100 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 99.5261 | 99.5261 | mus_musculus_balbcj | MGP_BALBcJ_P0090865 | 99.5261 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 49.763 | 47.3934 | mus_pahari | MGP_PahariEiJ_P0053356 | 89.7436 | 85.4701 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 99.5261 | mus_pahari | MGP_PahariEiJ_P0054661 | 100 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0090414 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0090580 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0090442 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 99.0521 | mus_spretus | MGP_SPRETEiJ_P0089935 | 100 | 99.0521 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 99.5261 | mus_spicilegus | ENSMSIP00000017103 | 100 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 98.1043 | 98.1043 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0091702 | 98.1043 | 98.1043 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 99.5261 | mus_musculus_casteij | MGP_CASTEiJ_P0091000 | 100 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0090879 | 100 | 100 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 99.5261 | 99.5261 | mus_musculus_c3hhej | MGP_C3HHeJ_P0090438 | 99.5261 | 99.5261 |
MGP_CBAJ_G0033898 | mus_musculus_cbaj | MGP_CBAJ_P0090366 | 36.019 | 27.9621 | mus_musculus_wsbeij | MGP_WSBEiJ_P0089476 | 40 | 31.0526 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |