RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CBAJ_G0029789 | Gene ID |
|
Accession |
- |
Symbol |
Sfswap |
Alias |
- |
Full Name |
splicing factor, suppressor of white-apricot homolog (Drosophila) |
Status |
Confidence |
Length |
77198 bases |
Strand |
Plus strand |
Position |
5 : 144116408 - 144193605 |
RNA binding domain |
DRY_EERY , Surp |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CBAJ_P0074196 |
DRY_EERY |
PF09750 |
2.3e-33 |
1 |
MGP_CBAJ_P0074196 |
Surp |
PF01805 |
2.9e-26 |
2 |
MGP_CBAJ_P0074196 |
Surp |
PF01805 |
2.9e-26 |
3 |
MGP_CBAJ_P0074197 |
DRY_EERY |
PF09750 |
1.3e-26 |
1 |
MGP_CBAJ_P0074204 |
Surp |
PF01805 |
1.4e-26 |
1 |
MGP_CBAJ_P0074204 |
Surp |
PF01805 |
1.4e-26 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Sfswap-001 |
MGP_CBAJ_T0074196 |
3313 |
945aa |
MGP_CBAJ_P0074196"/note="transcript_id=MGP_CBAJ_T0074196 |
- |
MGP_CBAJ_T0074197 |
2625 |
121aa |
MGP_CBAJ_P0074197"/note="transcript_id=MGP_CBAJ_T0074197 |
- |
MGP_CBAJ_T0074198 |
3398 |
No protein |
- |
- |
MGP_CBAJ_T0074199 |
5127 |
No protein |
- |
- |
MGP_CBAJ_T0074200 |
437 |
82aa |
MGP_CBAJ_P0074200"/note="transcript_id=MGP_CBAJ_T0074200 |
- |
MGP_CBAJ_T0074201 |
655 |
No protein |
- |
- |
MGP_CBAJ_T0074202 |
692 |
No protein |
- |
- |
MGP_CBAJ_T0074203 |
305 |
No protein |
- |
- |
MGP_CBAJ_T0074204 |
2073 |
690aa |
MGP_CBAJ_P0074204"/note="transcript_id=MGP_CBAJ_T0074204 |
- |
MGP_CBAJ_T0074205 |
725 |
No protein |
- |
- |
MGP_CBAJ_T0074206 |
559 |
68aa |
MGP_CBAJ_P0074206"/note="transcript_id=MGP_CBAJ_T0074206 |
- |
MGP_CBAJ_T0074207 |
2107 |
No protein |
- |
- |
MGP_CBAJ_T0074208 |
426 |
No protein |
- |
- |
MGP_CBAJ_T0074209 |
1277 |
No protein |
- |
- |
MGP_CBAJ_T0074210 |
680 |
No protein |
- |
- |
MGP_CBAJ_T0074211 |
668 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0081602 | 42.9641 | 24.8503 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 30.3704 | 17.5661 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 99.7884 | 99.4709 | mus_caroli | MGP_CAROLIEiJ_P0071020 | 99.7884 | 99.4709 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074594 | 99.6835 | 99.6835 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0074673 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0074395 | 99.6835 | 99.6835 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075081 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus | ENSMUSP00000062413 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 99.3651 | 98.6243 | rattus_norvegicus | ENSRNOP00000070951 | 94.2771 | 93.5743 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0074246 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0074611 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 99.3651 | 98.9418 | mus_pahari | MGP_PahariEiJ_P0059220 | 99.0506 | 98.6287 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 99.8942 | mus_musculus_fvbnj | MGP_FVBNJ_P0074239 | 99.6835 | 99.5781 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0074334 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0074242 | 99.6835 | 99.6835 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 99.7884 | 99.4709 | mus_spretus | MGP_SPRETEiJ_P0073726 | 99.7884 | 99.4709 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 99.6825 | mus_spicilegus | ENSMSIP00000005333 | 94.8795 | 94.5783 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0075314 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0074795 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0074574 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0074245 | 100 | 100 |
MGP_CBAJ_G0029789 | mus_musculus_cbaj | MGP_CBAJ_P0074196 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0073370 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |