Description

Ensembl ID MGP_CBAJ_G0029789 Gene ID Accession -
Symbol Sfswap Alias - Full Name splicing factor, suppressor of white-apricot homolog (Drosophila)
Status Confidence Length 77198 bases Strand Plus strand
Position 5 : 144116408 - 144193605 RNA binding domain DRY_EERY , Surp
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CBAJ_P0074196 DRY_EERY PF09750 2.3e-33 1
MGP_CBAJ_P0074196 Surp PF01805 2.9e-26 2
MGP_CBAJ_P0074196 Surp PF01805 2.9e-26 3
MGP_CBAJ_P0074197 DRY_EERY PF09750 1.3e-26 1
MGP_CBAJ_P0074204 Surp PF01805 1.4e-26 1
MGP_CBAJ_P0074204 Surp PF01805 1.4e-26 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sfswap-001 MGP_CBAJ_T0074196 3313 945aa MGP_CBAJ_P0074196"/note="transcript_id=MGP_CBAJ_T0074196
- MGP_CBAJ_T0074197 2625 121aa MGP_CBAJ_P0074197"/note="transcript_id=MGP_CBAJ_T0074197
- MGP_CBAJ_T0074198 3398 No protein -
- MGP_CBAJ_T0074199 5127 No protein -
- MGP_CBAJ_T0074200 437 82aa MGP_CBAJ_P0074200"/note="transcript_id=MGP_CBAJ_T0074200
- MGP_CBAJ_T0074201 655 No protein -
- MGP_CBAJ_T0074202 692 No protein -
- MGP_CBAJ_T0074203 305 No protein -
- MGP_CBAJ_T0074204 2073 690aa MGP_CBAJ_P0074204"/note="transcript_id=MGP_CBAJ_T0074204
- MGP_CBAJ_T0074205 725 No protein -
- MGP_CBAJ_T0074206 559 68aa MGP_CBAJ_P0074206"/note="transcript_id=MGP_CBAJ_T0074206
- MGP_CBAJ_T0074207 2107 No protein -
- MGP_CBAJ_T0074208 426 No protein -
- MGP_CBAJ_T0074209 1277 No protein -
- MGP_CBAJ_T0074210 680 No protein -
- MGP_CBAJ_T0074211 668 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P008160242.964124.8503mus_musculus_cbajMGP_CBAJ_P007419630.370417.5661

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P007419699.788499.4709mus_caroliMGP_CAROLIEiJ_P007102099.788499.4709
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_129s1svimjMGP_129S1SvImJ_P007459499.683599.6835
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_ajMGP_AJ_P0074673100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_lpjMGP_LPJ_P007439599.683599.6835
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0075081100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculusENSMUSP00000062413100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P007419699.365198.6243rattus_norvegicusENSRNOP0000007095194.277193.5743
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_pwkphjMGP_PWKPhJ_P0074246100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_balbcjMGP_BALBcJ_P0074611100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P007419699.365198.9418mus_pahariMGP_PahariEiJ_P005922099.050698.6287
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P007419610099.8942mus_musculus_fvbnjMGP_FVBNJ_P007423999.683599.5781
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_dba2jMGP_DBA2J_P0074334100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_nodshiltjMGP_NODShiLtJ_P007424299.683599.6835
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P007419699.788499.4709mus_spretusMGP_SPRETEiJ_P007372699.788499.4709
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P007419610099.6825mus_spicilegusENSMSIP0000000533394.879594.5783
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0075314100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_casteijMGP_CASTEiJ_P0074795100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_akrjMGP_AKRJ_P0074574100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_c3hhejMGP_C3HHeJ_P0074245100100
MGP_CBAJ_G0029789mus_musculus_cbajMGP_CBAJ_P0074196100100mus_musculus_wsbeijMGP_WSBEiJ_P0073370100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression