RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CBAJ_G0028600 | Gene ID |
|
Accession |
- |
Symbol |
Syf2 |
Alias |
- |
Full Name |
SYF2 homolog, RNA splicing factor (S. cerevisiae) |
Status |
Confidence |
Length |
6637 bases |
Strand |
Plus strand |
Position |
4 : 146046969 - 146053605 |
RNA binding domain |
SYF2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CBAJ_P0068152 |
SYF2 |
PF08231 |
7.8e-54 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Syf2-001 |
MGP_CBAJ_T0068152 |
1369 |
242aa |
MGP_CBAJ_P0068152"/note="transcript_id=MGP_CBAJ_T0068152 |
- |
MGP_CBAJ_T0068153 |
815 |
No protein |
- |
- |
MGP_CBAJ_T0068154 |
869 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0028600 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0065130 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0068559 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0068615 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0068381 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0069027 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus | ENSMUSP00000030622 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | rattus_norvegicus | ENSRNOP00000072888 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0068165 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0068540 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0080216 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0068196 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0068286 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0068200 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0067673 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_spicilegus | ENSMSIP00000003463 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 99.5868 | 99.5868 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0069211 | 99.5868 | 99.5868 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0068666 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0068526 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0068204 | 100 | 100 |
MGP_CBAJ_G0028600 | mus_musculus_cbaj | MGP_CBAJ_P0068152 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0067389 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |