Description

Ensembl ID MGP_CBAJ_G0028600 Gene ID Accession -
Symbol Syf2 Alias - Full Name SYF2 homolog, RNA splicing factor (S. cerevisiae)
Status Confidence Length 6637 bases Strand Plus strand
Position 4 : 146046969 - 146053605 RNA binding domain SYF2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CBAJ_P0068152 SYF2 PF08231 7.8e-54 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Syf2-001 MGP_CBAJ_T0068152 1369 242aa MGP_CBAJ_P0068152"/note="transcript_id=MGP_CBAJ_T0068152
- MGP_CBAJ_T0068153 815 No protein -
- MGP_CBAJ_T0068154 869 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0028600

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_caroliMGP_CAROLIEiJ_P0065130100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0068559100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_ajMGP_AJ_P0068615100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_lpjMGP_LPJ_P0068381100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0069027100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculusENSMUSP00000030622100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100rattus_norvegicusENSRNOP00000072888100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_pwkphjMGP_PWKPhJ_P0068165100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_balbcjMGP_BALBcJ_P0068540100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_pahariMGP_PahariEiJ_P0080216100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_fvbnjMGP_FVBNJ_P0068196100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_dba2jMGP_DBA2J_P0068286100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0068200100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_spretusMGP_SPRETEiJ_P0067673100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_spicilegusENSMSIP00000003463100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P006815299.586899.5868mus_musculus_nzohlltjMGP_NZOHlLtJ_P006921199.586899.5868
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_casteijMGP_CASTEiJ_P0068666100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_akrjMGP_AKRJ_P0068526100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_c3hhejMGP_C3HHeJ_P0068204100100
MGP_CBAJ_G0028600mus_musculus_cbajMGP_CBAJ_P0068152100100mus_musculus_wsbeijMGP_WSBEiJ_P0067389100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression