| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_CBAJ_G0019077 | Gene ID |
|
Accession |
- |
| Symbol |
Rpl38 |
Alias |
- |
Full Name |
ribosomal protein L38 |
| Status |
Confidence |
Length |
3981 bases |
Strand |
Plus strand |
| Position |
11 : 127036423 - 127040403 |
RNA binding domain |
Ribosomal_L38e |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_CBAJ_P0032954 |
Ribosomal_L38e |
PF01781 |
3.9e-36 |
1 |
| MGP_CBAJ_P0032955 |
Ribosomal_L38e |
PF01781 |
3.9e-36 |
1 |
| MGP_CBAJ_P0032956 |
Ribosomal_L38e |
PF01781 |
3.9e-36 |
1 |
| MGP_CBAJ_P0032957 |
Ribosomal_L38e |
PF01781 |
3.9e-36 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Rpl38-001 |
MGP_CBAJ_T0032954 |
371 |
70aa |
MGP_CBAJ_P0032954"/note="transcript_id=MGP_CBAJ_T0032954 |
| - |
MGP_CBAJ_T0032955 |
364 |
70aa |
MGP_CBAJ_P0032955"/note="transcript_id=MGP_CBAJ_T0032955 |
| - |
MGP_CBAJ_T0032956 |
450 |
70aa |
MGP_CBAJ_P0032956"/note="transcript_id=MGP_CBAJ_T0032956 |
| - |
MGP_CBAJ_T0032957 |
345 |
70aa |
MGP_CBAJ_P0032957"/note="transcript_id=MGP_CBAJ_T0032957 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_CBAJ_G0019077 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0030793 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0033322 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0033271 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0033224 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033757 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus | ENSMUSP00000102209 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 75.7143 | 64.2857 | rattus_norvegicus | ENSRNOP00000069710 | 85.4839 | 72.5806 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0032594 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0033257 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0037520 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0033088 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0033099 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0033092 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0032242 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_spicilegus | ENSMSIP00000035713 | 57.8512 | 57.8512 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 98.5714 | 97.1429 | mus_spicilegus | ENSMSIP00000011075 | 98.5714 | 97.1429 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0033795 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0032894 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0033254 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0033043 | 100 | 100 |
| MGP_CBAJ_G0019077 | mus_musculus_cbaj | MGP_CBAJ_P0032956 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0032508 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |