Description

Ensembl ID MGP_CBAJ_G0019077 Gene ID Accession -
Symbol Rpl38 Alias - Full Name ribosomal protein L38
Status Confidence Length 3981 bases Strand Plus strand
Position 11 : 127036423 - 127040403 RNA binding domain Ribosomal_L38e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CBAJ_P0032954 Ribosomal_L38e PF01781 3.9e-36 1
MGP_CBAJ_P0032955 Ribosomal_L38e PF01781 3.9e-36 1
MGP_CBAJ_P0032956 Ribosomal_L38e PF01781 3.9e-36 1
MGP_CBAJ_P0032957 Ribosomal_L38e PF01781 3.9e-36 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpl38-001 MGP_CBAJ_T0032954 371 70aa MGP_CBAJ_P0032954"/note="transcript_id=MGP_CBAJ_T0032954
- MGP_CBAJ_T0032955 364 70aa MGP_CBAJ_P0032955"/note="transcript_id=MGP_CBAJ_T0032955
- MGP_CBAJ_T0032956 450 70aa MGP_CBAJ_P0032956"/note="transcript_id=MGP_CBAJ_T0032956
- MGP_CBAJ_T0032957 345 70aa MGP_CBAJ_P0032957"/note="transcript_id=MGP_CBAJ_T0032957

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0019077

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_caroliMGP_CAROLIEiJ_P0030793100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0033322100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_ajMGP_AJ_P0033271100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_lpjMGP_LPJ_P0033224100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0033757100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculusENSMUSP00000102209100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P003295675.714364.2857rattus_norvegicusENSRNOP0000006971085.483972.5806
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_pwkphjMGP_PWKPhJ_P0032594100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_balbcjMGP_BALBcJ_P0033257100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_pahariMGP_PahariEiJ_P0037520100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_fvbnjMGP_FVBNJ_P0033088100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_dba2jMGP_DBA2J_P0033099100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0033092100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_spretusMGP_SPRETEiJ_P0032242100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_spicilegusENSMSIP0000003571357.851257.8512
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P003295698.571497.1429mus_spicilegusENSMSIP0000001107598.571497.1429
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0033795100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_casteijMGP_CASTEiJ_P0032894100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_akrjMGP_AKRJ_P0033254100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_c3hhejMGP_C3HHeJ_P0033043100100
MGP_CBAJ_G0019077mus_musculus_cbajMGP_CBAJ_P0032956100100mus_musculus_wsbeijMGP_WSBEiJ_P0032508100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression