Description

Ensembl ID MGP_CBAJ_G0018800 Gene ID Accession -
Symbol Casc3 Alias - Full Name cancer susceptibility candidate 3
Status Confidence Length 29904 bases Strand Plus strand
Position 11 : 108870423 - 108900326 RNA binding domain Btz
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CBAJ_P0031843 Btz PF09405 7.6e-22 1
MGP_CBAJ_P0031844 Btz PF09405 7.6e-22 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Casc3-001 MGP_CBAJ_T0031843 3927 698aa MGP_CBAJ_P0031843"/note="transcript_id=MGP_CBAJ_T0031843
- MGP_CBAJ_T0031844 3741 698aa MGP_CBAJ_P0031844"/note="transcript_id=MGP_CBAJ_T0031844
- MGP_CBAJ_T0031845 368 No protein -
- MGP_CBAJ_T0031846 605 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0018800

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.283798.9971mus_caroliMGP_CAROLIEiJ_P002971599.283798.9971
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.856799.8567mus_musculus_129s1svimjMGP_129S1SvImJ_P0032201100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_ajMGP_AJ_P0032142100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.856799.8567mus_musculus_lpjMGP_LPJ_P0032101100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0032647100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculusENSMUSP00000017384100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184396.991495.702rattus_norvegicusENSRNOP0000008417293.508392.2652
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.856799.8567mus_musculus_pwkphjMGP_PWKPhJ_P003144199.856799.8567
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_balbcjMGP_BALBcJ_P0032133100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184329.512918.1948mus_pahariMGP_PahariEiJ_P003644129.512918.1948
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.856799.8567mus_musculus_fvbnjMGP_FVBNJ_P0031975100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.856799.8567mus_musculus_dba2jMGP_DBA2J_P0031984100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0031962100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.570299.4269mus_spretusMGP_SPRETEiJ_P003113599.570299.4269
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.426999.4269mus_spicilegusENSMSIP0000003142499.426999.4269
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0032672100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_casteijMGP_CASTEiJ_P0031728100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_akrjMGP_AKRJ_P0032124100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P003184399.856799.8567mus_musculus_c3hhejMGP_C3HHeJ_P0031930100100
MGP_CBAJ_G0018800mus_musculus_cbajMGP_CBAJ_P0031843100100mus_musculus_wsbeijMGP_WSBEiJ_P0031403100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression