RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CBAJ_G0018800 | Gene ID |
|
Accession |
- |
Symbol |
Casc3 |
Alias |
- |
Full Name |
cancer susceptibility candidate 3 |
Status |
Confidence |
Length |
29904 bases |
Strand |
Plus strand |
Position |
11 : 108870423 - 108900326 |
RNA binding domain |
Btz |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CBAJ_P0031843 |
Btz |
PF09405 |
7.6e-22 |
1 |
MGP_CBAJ_P0031844 |
Btz |
PF09405 |
7.6e-22 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Casc3-001 |
MGP_CBAJ_T0031843 |
3927 |
698aa |
MGP_CBAJ_P0031843"/note="transcript_id=MGP_CBAJ_T0031843 |
- |
MGP_CBAJ_T0031844 |
3741 |
698aa |
MGP_CBAJ_P0031844"/note="transcript_id=MGP_CBAJ_T0031844 |
- |
MGP_CBAJ_T0031845 |
368 |
No protein |
- |
- |
MGP_CBAJ_T0031846 |
605 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0018800 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.2837 | 98.9971 | mus_caroli | MGP_CAROLIEiJ_P0029715 | 99.2837 | 98.9971 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.8567 | 99.8567 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0032201 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0032142 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.8567 | 99.8567 | mus_musculus_lpj | MGP_LPJ_P0032101 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0032647 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus | ENSMUSP00000017384 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 96.9914 | 95.702 | rattus_norvegicus | ENSRNOP00000084172 | 93.5083 | 92.2652 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.8567 | 99.8567 | mus_musculus_pwkphj | MGP_PWKPhJ_P0031441 | 99.8567 | 99.8567 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0032133 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 29.5129 | 18.1948 | mus_pahari | MGP_PahariEiJ_P0036441 | 29.5129 | 18.1948 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.8567 | 99.8567 | mus_musculus_fvbnj | MGP_FVBNJ_P0031975 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.8567 | 99.8567 | mus_musculus_dba2j | MGP_DBA2J_P0031984 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0031962 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.5702 | 99.4269 | mus_spretus | MGP_SPRETEiJ_P0031135 | 99.5702 | 99.4269 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.4269 | 99.4269 | mus_spicilegus | ENSMSIP00000031424 | 99.4269 | 99.4269 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0032672 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0031728 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0032124 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 99.8567 | 99.8567 | mus_musculus_c3hhej | MGP_C3HHeJ_P0031930 | 100 | 100 |
MGP_CBAJ_G0018800 | mus_musculus_cbaj | MGP_CBAJ_P0031843 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0031403 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |