Description

Ensembl ID MGP_CBAJ_G0017757 Gene ID Accession -
Symbol Tbrg4 Alias - Full Name transforming growth factor beta regulated gene 4
Status Confidence Length 10621 bases Strand Minus strand
Position 11 : 4289859 - 4300479 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CBAJ_P0027689 RAP PF08373 3.5e-10 1
MGP_CBAJ_P0027689 FAST_2 PF08368 2.1e-25 2
MGP_CBAJ_P0027689 FAST_1 PF06743 5.2e-21 3
MGP_CBAJ_P0027690 RAP PF08373 3.5e-10 1
MGP_CBAJ_P0027690 FAST_2 PF08368 2.1e-25 2
MGP_CBAJ_P0027690 FAST_1 PF06743 5.2e-21 3
MGP_CBAJ_P0027691 RAP PF08373 3.5e-10 1
MGP_CBAJ_P0027691 FAST_2 PF08368 2.1e-25 2
MGP_CBAJ_P0027691 FAST_1 PF06743 5.2e-21 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tbrg4-001 MGP_CBAJ_T0027689 2324 630aa MGP_CBAJ_P0027689"/note="transcript_id=MGP_CBAJ_T0027689
- MGP_CBAJ_T0027690 2347 630aa MGP_CBAJ_P0027690"/note="transcript_id=MGP_CBAJ_T0027690
- MGP_CBAJ_T0027691 2290 630aa MGP_CBAJ_P0027691"/note="transcript_id=MGP_CBAJ_T0027691
- MGP_CBAJ_T0027692 2241 365aa MGP_CBAJ_P0027692"/note="transcript_id=MGP_CBAJ_T0027692
- MGP_CBAJ_T0027693 682 No protein -
- MGP_CBAJ_T0027694 582 No protein -
- MGP_CBAJ_T0027695 602 No protein -
- MGP_CBAJ_T0027696 652 No protein -
- MGP_CBAJ_T0027697 380 No protein -
- MGP_CBAJ_T0027698 647 158aa MGP_CBAJ_P0027698"/note="transcript_id=MGP_CBAJ_T0027698
- MGP_CBAJ_T0027699 853 No protein -
- MGP_CBAJ_T0027700 540 112aa MGP_CBAJ_P0027700"/note="transcript_id=MGP_CBAJ_T0027700

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P005478532.328116.0434mus_musculus_cbajMGP_CBAJ_P002769042.539721.1111
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P001994632.075514.6589mus_musculus_cbajMGP_CBAJ_P002769035.079416.0317
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P005732126.765813.1351mus_musculus_cbajMGP_CBAJ_P002769034.285716.8254
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P003713834.190618.003mus_musculus_cbajMGP_CBAJ_P002769035.87318.8889
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P007004333.761517.7982mus_musculus_cbajMGP_CBAJ_P002769029.206315.3968

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P002769099.047698.254mus_caroliMGP_CAROLIEiJ_P002563299.047698.254
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_ajMGP_AJ_P0027985100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_lpjMGP_LPJ_P0027933100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculusENSMUSP00000140835100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P002769096.507992.5397rattus_norvegicusENSRNOP0000007422396.661492.6868
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_pwkphjMGP_PWKPhJ_P0027065100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_balbcjMGP_BALBcJ_P0027965100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P002769098.571497.4603mus_pahariMGP_PahariEiJ_P003030998.728197.6153
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_fvbnjMGP_FVBNJ_P0027806100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_dba2jMGP_DBA2J_P0027817100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027788100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P002769099.841399.6825mus_spretusMGP_SPRETEiJ_P002696999.841399.6825
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P002769099.682598.8889mus_spicilegusENSMSIP0000002729599.682598.8889
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028491100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_casteijMGP_CASTEiJ_P0027369100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_akrjMGP_AKRJ_P0027945100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_c3hhejMGP_C3HHeJ_P0027761100100
MGP_CBAJ_G0017757mus_musculus_cbajMGP_CBAJ_P0027690100100mus_musculus_wsbeijMGP_WSBEiJ_P0027272100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression