Description

Ensembl ID MGP_CASTEiJ_G0034461 Gene ID Accession -
Symbol Exosc7 Alias - Full Name exosome component 7
Status Confidence Length 24396 bases Strand Plus strand
Position 9 : 125042689 - 125067084 RNA binding domain RNase_PH , RNase_PH_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0095536 RNase_PH PF01138 3.8e-23 1
MGP_CASTEiJ_P0095536 RNase_PH_C PF03725 8.5e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc7-001 MGP_CASTEiJ_T0095536 1055 291aa MGP_CASTEiJ_P0095536"/note="transcript_id=MGP_CASTEiJ_T0095536
- MGP_CASTEiJ_T0095537 706 No protein -
- MGP_CASTEiJ_T0095538 687 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P006077346.376828.9855mus_musculus_casteijMGP_CASTEiJ_P009553643.986327.4914
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P006045830.593618.7215mus_musculus_casteijMGP_CASTEiJ_P009553646.048128.1787

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_129s1svimjMGP_129S1SvImJ_P009534810099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553699.656499.3127mus_caroliMGP_CAROLIEiJ_P009072199.656499.3127
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_ajMGP_AJ_P009544210099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_balbcjMGP_BALBcJ_P009536310099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_dba2jMGP_DBA2J_P009505410099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_c57bl6njMGP_C57BL6NJ_P009587310099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_fvbnjMGP_FVBNJ_P009491210099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_c3hhejMGP_C3HHeJ_P009492610099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_lpjMGP_LPJ_P009507610099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_nodshiltjMGP_NODShiLtJ_P009488010099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_cbajMGP_CBAJ_P009484910099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculusENSMUSP0000002689110099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_nzohlltjMGP_NZOHlLtJ_P009621310099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.3127mus_musculus_pwkphjMGP_PWKPhJ_P009496010099.3127
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_pahariMGP_PahariEiJ_P002639510099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_akrjMGP_AKRJ_P009539310099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_spretusMGP_SPRETEiJ_P009446710099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553692.096289.0034rattus_norvegicusENSRNOP0000007965080.480577.7778
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_spicilegusENSMSIP0000002635510099.6564
MGP_CASTEiJ_G0034461mus_musculus_casteijMGP_CASTEiJ_P009553610099.6564mus_musculus_wsbeijMGP_WSBEiJ_P009390810099.6564

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression