RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0034461 | Gene ID |
|
Accession |
- |
Symbol |
Exosc7 |
Alias |
- |
Full Name |
exosome component 7 |
Status |
Confidence |
Length |
24396 bases |
Strand |
Plus strand |
Position |
9 : 125042689 - 125067084 |
RNA binding domain |
RNase_PH , RNase_PH_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0095536 |
RNase_PH |
PF01138 |
3.8e-23 |
1 |
MGP_CASTEiJ_P0095536 |
RNase_PH_C |
PF03725 |
8.5e-12 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Exosc7-001 |
MGP_CASTEiJ_T0095536 |
1055 |
291aa |
MGP_CASTEiJ_P0095536"/note="transcript_id=MGP_CASTEiJ_T0095536 |
- |
MGP_CASTEiJ_T0095537 |
706 |
No protein |
- |
- |
MGP_CASTEiJ_T0095538 |
687 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0060773 | 46.3768 | 28.9855 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 43.9863 | 27.4914 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0060458 | 30.5936 | 18.7215 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 46.0481 | 28.1787 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0095348 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 99.6564 | 99.3127 | mus_caroli | MGP_CAROLIEiJ_P0090721 | 99.6564 | 99.3127 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_aj | MGP_AJ_P0095442 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_balbcj | MGP_BALBcJ_P0095363 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_dba2j | MGP_DBA2J_P0095054 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0095873 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_fvbnj | MGP_FVBNJ_P0094912 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_c3hhej | MGP_C3HHeJ_P0094926 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_lpj | MGP_LPJ_P0095076 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0094880 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_cbaj | MGP_CBAJ_P0094849 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus | ENSMUSP00000026891 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0096213 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.3127 | mus_musculus_pwkphj | MGP_PWKPhJ_P0094960 | 100 | 99.3127 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_pahari | MGP_PahariEiJ_P0026395 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_akrj | MGP_AKRJ_P0095393 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_spretus | MGP_SPRETEiJ_P0094467 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 92.0962 | 89.0034 | rattus_norvegicus | ENSRNOP00000079650 | 80.4805 | 77.7778 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_spicilegus | ENSMSIP00000026355 | 100 | 99.6564 |
MGP_CASTEiJ_G0034461 | mus_musculus_casteij | MGP_CASTEiJ_P0095536 | 100 | 99.6564 | mus_musculus_wsbeij | MGP_WSBEiJ_P0093908 | 100 | 99.6564 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |