Description

Ensembl ID MGP_CASTEiJ_G0033796 Gene ID Accession -
Symbol Fdxacb1 Alias - Full Name ferredoxin-fold anticodon binding domain containing 1
Status Confidence Length 5107 bases Strand Plus strand
Position 9 : 49604207 - 49609313 RNA binding domain FDX-ACB
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0092480 FDX-ACB PF03147 1.7e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- MGP_CASTEiJ_T0092478 2529 No protein -
- MGP_CASTEiJ_T0092479 864 115aa MGP_CASTEiJ_P0092479"/note="transcript_id=MGP_CASTEiJ_T0092479
- MGP_CASTEiJ_T0092480 2645 622aa MGP_CASTEiJ_P0092480"/note="transcript_id=MGP_CASTEiJ_T0092480
- MGP_CASTEiJ_T0092482 518 117aa MGP_CASTEiJ_P0092482"/note="transcript_id=MGP_CASTEiJ_T0092482

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P008986729.527616.1417mus_musculus_casteijMGP_CASTEiJ_P009248024.115813.1833
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P003639842.350325.7206mus_musculus_casteijMGP_CASTEiJ_P009248030.707418.6495

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.678599.6785mus_musculus_129s1svimjMGP_129S1SvImJ_P009230599.678599.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248097.749296.6238mus_caroliMGP_CAROLIEiJ_P008780997.749296.6238
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_ajMGP_AJ_P009237899.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_balbcjMGP_BALBcJ_P009230299.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_dba2jMGP_DBA2J_P009201999.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.8392mus_musculus_c57bl6njMGP_C57BL6NJ_P009283699.839299.8392
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.8392mus_musculus_fvbnjMGP_FVBNJ_P009185699.839299.8392
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_c3hhejMGP_C3HHeJ_P009188099.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.678599.6785mus_musculus_lpjMGP_LPJ_P009203299.678599.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_nodshiltjMGP_NODShiLtJ_P009186399.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_cbajMGP_CBAJ_P009181299.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.8392mus_musculusENSMUSP0000003708299.839299.8392
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.6785mus_musculus_nzohlltjMGP_NZOHlLtJ_P009314799.839299.6785
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.8392mus_musculus_pwkphjMGP_PWKPhJ_P009190499.839299.8392
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248097.266994.8553mus_pahariMGP_PahariEiJ_P002346297.266994.8553
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.8392mus_musculus_akrjMGP_AKRJ_P009233099.839299.8392
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248098.874698.2315mus_spretusMGP_SPRETEiJ_P009140398.874698.2315
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248092.604588.2637rattus_norvegicusENSRNOP0000008567093.354988.9789
MGP_CASTEiJ_G0033796mus_musculus_casteijMGP_CASTEiJ_P009248099.839299.8392mus_musculus_wsbeijMGP_WSBEiJ_P009090299.839299.8392

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression