Description

Ensembl ID MGP_CASTEiJ_G0032891 Gene ID Accession -
Symbol Farsa Alias - Full Name phenylalanyl-tRNA synthetase, alpha subunit
Status Confidence Length 13904 bases Strand Plus strand
Position 8 : 84888595 - 84902498 RNA binding domain PheRS_DBD1 , PheRS_DBD3 , tRNA-synt_2d
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0089871 PheRS_DBD1 PF18552 6.6e-23 1
MGP_CASTEiJ_P0089867 PheRS_DBD1 PF18552 6.2e-22 1
MGP_CASTEiJ_P0089867 PheRS_DBD3 PF18553 1.1e-19 2
MGP_CASTEiJ_P0089867 tRNA-synt_2d PF01409 3.6e-91 3
MGP_CASTEiJ_P0089870 PheRS_DBD1 PF18552 6.2e-22 1
MGP_CASTEiJ_P0089870 PheRS_DBD3 PF18553 1.1e-19 2
MGP_CASTEiJ_P0089870 tRNA-synt_2d PF01409 2.1e-91 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Farsa-001 MGP_CASTEiJ_T0089867 1827 508aa MGP_CASTEiJ_P0089867"/note="transcript_id=MGP_CASTEiJ_T0089867
- MGP_CASTEiJ_T0089868 1921 No protein -
- MGP_CASTEiJ_T0089869 3314 No protein -
- MGP_CASTEiJ_T0089870 1796 507aa MGP_CASTEiJ_P0089870"/note="transcript_id=MGP_CASTEiJ_T0089870
- MGP_CASTEiJ_T0089871 1709 105aa MGP_CASTEiJ_P0089871"/note="transcript_id=MGP_CASTEiJ_T0089871
- MGP_CASTEiJ_T0089872 730 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P003639831.92919.2905mus_musculus_casteijMGP_CASTEiJ_P008986728.346517.126
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P009248024.115813.1833mus_musculus_casteijMGP_CASTEiJ_P008986729.527616.1417

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986710099.8031mus_musculus_129s1svimjMGP_129S1SvImJ_P008973210099.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986799.803199.2126mus_caroliMGP_CAROLIEiJ_P008530499.803199.2126
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986710099.8031mus_musculus_ajMGP_AJ_P008981410099.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986710099.8031mus_musculus_balbcjMGP_BALBcJ_P008974910099.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_musculus_dba2jMGP_DBA2J_P0089456100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986799.803199.8031mus_musculus_c57bl6njMGP_C57BL6NJ_P009027199.803199.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_musculus_fvbnjMGP_FVBNJ_P0089302100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_musculus_c3hhejMGP_C3HHeJ_P0089318100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986710099.8031mus_musculus_lpjMGP_LPJ_P008949110099.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0089323100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_musculus_cbajMGP_CBAJ_P0089251100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986799.803199.8031mus_musculusENSMUSP0000000390699.803199.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986799.803199.8031mus_musculus_nzohlltjMGP_NZOHlLtJ_P009057499.803199.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_musculus_pwkphjMGP_PWKPhJ_P0089292100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986799.212698.622mus_pahariMGP_PahariEiJ_P005357199.212698.622
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986710099.8031mus_musculus_akrjMGP_AKRJ_P008975310099.8031
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P0089867100100mus_spretusMGP_SPRETEiJ_P0088805100100
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986792.322891.7323rattus_norvegicusENSRNOP0000007665588.323987.7589
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986799.803199.6063mus_spicilegusENSMSIP0000001635999.803199.6063
MGP_CASTEiJ_G0032891mus_musculus_casteijMGP_CASTEiJ_P008986710099.8031mus_musculus_wsbeijMGP_WSBEiJ_P008836410099.8031

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression