Description

Ensembl ID MGP_CASTEiJ_G0029384 Gene ID Accession -
Symbol 3110082I17Rik Alias - Full Name RIKEN cDNA 3110082I17 gene
Status Confidence Length 108821 bases Strand Minus strand
Position 5 : 142709896 - 142818716 RNA binding domain WKF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0075663 WKF PF10180 1.4e-22 1
MGP_CASTEiJ_P0075664 WKF PF10180 3.5e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
3110082I17Rik-001 MGP_CASTEiJ_T0075663 1415 195aa MGP_CASTEiJ_P0075663"/note="transcript_id=MGP_CASTEiJ_T0075663
- MGP_CASTEiJ_T0075664 2018 178aa MGP_CASTEiJ_P0075664"/note="transcript_id=MGP_CASTEiJ_T0075664
- MGP_CASTEiJ_T0075665 686 No protein -
- MGP_CASTEiJ_T0075675 645 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0029384

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_129s1svimjMGP_129S1SvImJ_P007546398.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974497.9487mus_caroliMGP_CAROLIEiJ_P007178698.974497.9487
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_ajMGP_AJ_P007554098.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_balbcjMGP_BALBcJ_P007549798.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_dba2jMGP_DBA2J_P007521898.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_c57bl6njMGP_C57BL6NJ_P007595498.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_fvbnjMGP_FVBNJ_P007511998.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_c3hhejMGP_C3HHeJ_P007511898.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_lpjMGP_LPJ_P007526698.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_nodshiltjMGP_NODShiLtJ_P007512398.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_cbajMGP_CBAJ_P007506598.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculusENSMUSP0000006923098.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_nzohlltjMGP_NZOHlLtJ_P007619998.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_pwkphjMGP_PWKPhJ_P007511698.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566395.384694.359mus_pahariMGP_PahariEiJ_P006000095.384694.359
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_akrjMGP_AKRJ_P007545198.974498.4615
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566397.435997.4359mus_spretusMGP_SPRETEiJ_P007460397.435997.4359
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566377.948771.7949rattus_norvegicusENSRNOP0000008023971.698166.0377
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566396.923196.4103mus_spicilegusENSMSIP0000003603896.923196.4103
MGP_CASTEiJ_G0029384mus_musculus_casteijMGP_CASTEiJ_P007566398.974498.4615mus_musculus_wsbeijMGP_WSBEiJ_P007425198.974498.4615

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression