RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0029384 | Gene ID |
|
Accession |
- |
Symbol |
3110082I17Rik |
Alias |
- |
Full Name |
RIKEN cDNA 3110082I17 gene |
Status |
Confidence |
Length |
108821 bases |
Strand |
Minus strand |
Position |
5 : 142709896 - 142818716 |
RNA binding domain |
WKF |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0075663 |
WKF |
PF10180 |
1.4e-22 |
1 |
MGP_CASTEiJ_P0075664 |
WKF |
PF10180 |
3.5e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
3110082I17Rik-001 |
MGP_CASTEiJ_T0075663 |
1415 |
195aa |
MGP_CASTEiJ_P0075663"/note="transcript_id=MGP_CASTEiJ_T0075663 |
- |
MGP_CASTEiJ_T0075664 |
2018 |
178aa |
MGP_CASTEiJ_P0075664"/note="transcript_id=MGP_CASTEiJ_T0075664 |
- |
MGP_CASTEiJ_T0075665 |
686 |
No protein |
- |
- |
MGP_CASTEiJ_T0075675 |
645 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0029384 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0075463 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 97.9487 | mus_caroli | MGP_CAROLIEiJ_P0071786 | 98.9744 | 97.9487 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_aj | MGP_AJ_P0075540 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_balbcj | MGP_BALBcJ_P0075497 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_dba2j | MGP_DBA2J_P0075218 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075954 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_fvbnj | MGP_FVBNJ_P0075119 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_c3hhej | MGP_C3HHeJ_P0075118 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_lpj | MGP_LPJ_P0075266 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0075123 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_cbaj | MGP_CBAJ_P0075065 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus | ENSMUSP00000069230 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0076199 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_pwkphj | MGP_PWKPhJ_P0075116 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 95.3846 | 94.359 | mus_pahari | MGP_PahariEiJ_P0060000 | 95.3846 | 94.359 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_akrj | MGP_AKRJ_P0075451 | 98.9744 | 98.4615 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 97.4359 | 97.4359 | mus_spretus | MGP_SPRETEiJ_P0074603 | 97.4359 | 97.4359 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 77.9487 | 71.7949 | rattus_norvegicus | ENSRNOP00000080239 | 71.6981 | 66.0377 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 96.9231 | 96.4103 | mus_spicilegus | ENSMSIP00000036038 | 96.9231 | 96.4103 |
MGP_CASTEiJ_G0029384 | mus_musculus_casteij | MGP_CASTEiJ_P0075663 | 98.9744 | 98.4615 | mus_musculus_wsbeij | MGP_WSBEiJ_P0074251 | 98.9744 | 98.4615 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |