Description

Ensembl ID MGP_CASTEiJ_G0029026 Gene ID Accession -
Symbol Sart3 Alias - Full Name squamous cell carcinoma antigen recognized by T cells 3
Status Confidence Length 31194 bases Strand Minus strand
Position 5 : 114821296 - 114852489 RNA binding domain RRM_1 , Lsm_interact
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0073645 RRM_1 PF00076 2.4e-32 1
MGP_CASTEiJ_P0073645 RRM_1 PF00076 2.4e-32 2
MGP_CASTEiJ_P0073646 RRM_1 PF00076 3.8e-32 1
MGP_CASTEiJ_P0073646 RRM_1 PF00076 3.8e-32 2
MGP_CASTEiJ_P0073646 Lsm_interact PF05391 3.4e-05 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sart3-001 MGP_CASTEiJ_T0073645 2265 716aa MGP_CASTEiJ_P0073645"/note="transcript_id=MGP_CASTEiJ_T0073645
- MGP_CASTEiJ_T0073646 4446 962aa MGP_CASTEiJ_P0073646"/note="transcript_id=MGP_CASTEiJ_T0073646
- MGP_CASTEiJ_T0073647 3262 401aa MGP_CASTEiJ_P0073647"/note="transcript_id=MGP_CASTEiJ_T0073647
- MGP_CASTEiJ_T0073648 606 No protein -
- MGP_CASTEiJ_T0073649 744 No protein -
- MGP_CASTEiJ_T0073650 524 No protein -
- MGP_CASTEiJ_T0073651 623 No protein -
- MGP_CASTEiJ_T0073652 510 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0029026

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_129s1svimjMGP_129S1SvImJ_P007344699.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.376399.2723mus_caroliMGP_CAROLIEiJ_P006991199.376399.2723
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_ajMGP_AJ_P007352099.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_balbcjMGP_BALBcJ_P007345499.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_dba2jMGP_DBA2J_P007319299.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_c57bl6njMGP_C57BL6NJ_P007393399.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_fvbnjMGP_FVBNJ_P007309899.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_c3hhejMGP_C3HHeJ_P007310599.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_lpjMGP_LPJ_P007324599.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_nodshiltjMGP_NODShiLtJ_P007309299.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_cbajMGP_CBAJ_P007305499.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculusENSMUSP0000001911899.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_nzohlltjMGP_NZOHlLtJ_P007415299.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.7921mus_musculus_pwkphjMGP_PWKPhJ_P007310199.89699.7921
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364697.81796.7775mus_pahariMGP_PahariEiJ_P005814998.328197.2832
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_akrjMGP_AKRJ_P007344399.89699.896
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.792199.6881mus_spretusMGP_SPRETEiJ_P007258599.792199.6881
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364696.569694.2827rattus_norvegicusENSRNOP0000000089194.989892.7403
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.792199.3763mus_spicilegusENSMSIP0000000899699.792199.3763
MGP_CASTEiJ_G0029026mus_musculus_casteijMGP_CASTEiJ_P007364699.89699.896mus_musculus_wsbeijMGP_WSBEiJ_P007224199.89699.896

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression