RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0027294 | Gene ID |
|
Accession |
- |
Symbol |
Aco1 |
Alias |
- |
Full Name |
aconitase 1 |
Status |
Confidence |
Length |
61195 bases |
Strand |
Plus strand |
Position |
4 : 37712961 - 37774155 |
RNA binding domain |
Aconitase , Aconitase_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0065032 |
Aconitase |
PF00330 |
8.3e-176 |
1 |
MGP_CASTEiJ_P0065032 |
Aconitase_C |
PF00694 |
3.4e-42 |
2 |
MGP_CASTEiJ_P0065035 |
Aconitase |
PF00330 |
2.3e-56 |
1 |
MGP_CASTEiJ_P0065035 |
Aconitase |
PF00330 |
2.3e-56 |
2 |
MGP_CASTEiJ_P0065035 |
Aconitase_C |
PF00694 |
1.2e-29 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Aco1-001 |
MGP_CASTEiJ_T0065032 |
3830 |
889aa |
MGP_CASTEiJ_P0065032"/note="transcript_id=MGP_CASTEiJ_T0065032 |
- |
MGP_CASTEiJ_T0065033 |
709 |
No protein |
- |
- |
MGP_CASTEiJ_T0065034 |
410 |
No protein |
- |
- |
MGP_CASTEiJ_T0065035 |
1008 |
301aa |
MGP_CASTEiJ_P0065035"/note="transcript_id=MGP_CASTEiJ_T0065035 |
- |
MGP_CASTEiJ_T0065036 |
638 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0092597 | 74.5587 | 57.217 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 80.7649 | 61.9798 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0041666 | 48.8462 | 30.7692 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 42.8571 | 26.9966 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0065042 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.4376 | 99.1001 | mus_caroli | MGP_CAROLIEiJ_P0061770 | 99.4376 | 99.1001 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_aj | MGP_AJ_P0065073 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_balbcj | MGP_BALBcJ_P0064993 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_dba2j | MGP_DBA2J_P0064754 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065482 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_fvbnj | MGP_FVBNJ_P0064703 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_c3hhej | MGP_C3HHeJ_P0064682 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_lpj | MGP_LPJ_P0064886 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0064707 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_cbaj | MGP_CBAJ_P0064631 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus | ENSMUSP00000100038 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0065698 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_pwkphj | MGP_PWKPhJ_P0064551 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.3251 | 98.7627 | mus_pahari | MGP_PahariEiJ_P0057433 | 99.3251 | 98.7627 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_akrj | MGP_AKRJ_P0065012 | 99.6625 | 99.4376 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.3251 | mus_spretus | MGP_SPRETEiJ_P0064202 | 99.6625 | 99.3251 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 98.2002 | 95.838 | rattus_norvegicus | ENSRNOP00000078636 | 98.2002 | 95.838 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.2126 | mus_spicilegus | ENSMSIP00000029488 | 99.6625 | 99.2126 |
MGP_CASTEiJ_G0027294 | mus_musculus_casteij | MGP_CASTEiJ_P0065032 | 99.6625 | 99.4376 | mus_musculus_wsbeij | MGP_WSBEiJ_P0063933 | 99.6625 | 99.4376 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |