Description

Ensembl ID MGP_CASTEiJ_G0027294 Gene ID Accession -
Symbol Aco1 Alias - Full Name aconitase 1
Status Confidence Length 61195 bases Strand Plus strand
Position 4 : 37712961 - 37774155 RNA binding domain Aconitase , Aconitase_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0065032 Aconitase PF00330 8.3e-176 1
MGP_CASTEiJ_P0065032 Aconitase_C PF00694 3.4e-42 2
MGP_CASTEiJ_P0065035 Aconitase PF00330 2.3e-56 1
MGP_CASTEiJ_P0065035 Aconitase PF00330 2.3e-56 2
MGP_CASTEiJ_P0065035 Aconitase_C PF00694 1.2e-29 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Aco1-001 MGP_CASTEiJ_T0065032 3830 889aa MGP_CASTEiJ_P0065032"/note="transcript_id=MGP_CASTEiJ_T0065032
- MGP_CASTEiJ_T0065033 709 No protein -
- MGP_CASTEiJ_T0065034 410 No protein -
- MGP_CASTEiJ_T0065035 1008 301aa MGP_CASTEiJ_P0065035"/note="transcript_id=MGP_CASTEiJ_T0065035
- MGP_CASTEiJ_T0065036 638 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P009259774.558757.217mus_musculus_casteijMGP_CASTEiJ_P006503280.764961.9798
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P004166648.846230.7692mus_musculus_casteijMGP_CASTEiJ_P006503242.857126.9966

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_129s1svimjMGP_129S1SvImJ_P006504299.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.437699.1001mus_caroliMGP_CAROLIEiJ_P006177099.437699.1001
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_ajMGP_AJ_P006507399.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_balbcjMGP_BALBcJ_P006499399.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_dba2jMGP_DBA2J_P006475499.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_c57bl6njMGP_C57BL6NJ_P006548299.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_fvbnjMGP_FVBNJ_P006470399.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_c3hhejMGP_C3HHeJ_P006468299.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_lpjMGP_LPJ_P006488699.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_nodshiltjMGP_NODShiLtJ_P006470799.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_cbajMGP_CBAJ_P006463199.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculusENSMUSP0000010003899.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_nzohlltjMGP_NZOHlLtJ_P006569899.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_pwkphjMGP_PWKPhJ_P006455199.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.325198.7627mus_pahariMGP_PahariEiJ_P005743399.325198.7627
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_akrjMGP_AKRJ_P006501299.662599.4376
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.3251mus_spretusMGP_SPRETEiJ_P006420299.662599.3251
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503298.200295.838rattus_norvegicusENSRNOP0000007863698.200295.838
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.2126mus_spicilegusENSMSIP0000002948899.662599.2126
MGP_CASTEiJ_G0027294mus_musculus_casteijMGP_CASTEiJ_P006503299.662599.4376mus_musculus_wsbeijMGP_WSBEiJ_P006393399.662599.4376

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression