RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0026071 | Gene ID |
|
Accession |
- |
Symbol |
Trp53rka |
Alias |
- |
Full Name |
transformation related protein 53 regulating kinase A |
Status |
Confidence |
Length |
6716 bases |
Strand |
Minus strand |
Position |
2 : 169716264 - 169722979 |
RNA binding domain |
RIO1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0059235 |
RIO1 |
PF01163 |
1.3e-07 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Trp53rka-001 |
MGP_CASTEiJ_T0059235 |
1852 |
244aa |
MGP_CASTEiJ_P0059235"/note="transcript_id=MGP_CASTEiJ_T0059235 |
- |
MGP_CASTEiJ_T0059237 |
842 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0026071 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 100 | 98.7705 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0059303 | 100 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 99.1803 | mus_caroli | MGP_CAROLIEiJ_P0056210 | 99.5902 | 99.1803 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_aj | MGP_AJ_P0059379 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_aj | MGP_AJ_P0059378 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_balbcj | MGP_BALBcJ_P0059311 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_balbcj | MGP_BALBcJ_P0059310 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_dba2j | MGP_DBA2J_P0059084 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_dba2j | MGP_DBA2J_P0059083 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0059734 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_fvbnj | MGP_FVBNJ_P0059017 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_c3hhej | MGP_C3HHeJ_P0058961 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 40.1639 | 38.5246 | mus_musculus_lpj | MGP_LPJ_P0059195 | 68.0556 | 65.2778 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0058995 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_cbaj | MGP_CBAJ_P0058932 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus | ENSMUSP00000045141 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0059967 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 98.7705 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0059966 | 99.1803 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 99.1803 | mus_musculus_pwkphj | MGP_PWKPhJ_P0058854 | 94.5312 | 94.5312 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.1803 | 99.1803 | mus_musculus_pwkphj | MGP_PWKPhJ_P0058853 | 94.5312 | 94.5312 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 98.3607 | 97.1311 | mus_pahari | MGP_PahariEiJ_P0067194 | 98.3607 | 97.1311 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_akrj | MGP_AKRJ_P0059275 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 100 | 99.5902 | mus_spretus | MGP_SPRETEiJ_P0058380 | 100 | 99.5902 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.7705 | mus_spretus | MGP_SPRETEiJ_P0058433 | 99.5902 | 98.7705 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 97.541 | 93.0328 | rattus_norvegicus | ENSRNOP00000046789 | 96.748 | 92.2764 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 97.9508 | 95.082 | rattus_norvegicus | ENSRNOP00000050360 | 97.9508 | 95.082 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 99.1803 | mus_spicilegus | ENSMSIP00000027574 | 90.6716 | 90.2985 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_wsbeij | MGP_WSBEiJ_P0058288 | 99.5902 | 98.3607 |
MGP_CASTEiJ_G0026071 | mus_musculus_casteij | MGP_CASTEiJ_P0059235 | 99.5902 | 98.3607 | mus_musculus_wsbeij | MGP_WSBEiJ_P0058287 | 99.5902 | 98.3607 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |