Description

Ensembl ID MGP_CASTEiJ_G0024998 Gene ID Accession -
Symbol Fastkd1 Alias - Full Name FAST kinase domains 1
Status Confidence Length 29826 bases Strand Minus strand
Position 2 : 69134252 - 69164077 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0055027 RAP PF08373 1.9e-16 1
MGP_CASTEiJ_P0055027 FAST_2 PF08368 3.3e-26 2
MGP_CASTEiJ_P0055027 FAST_1 PF06743 2e-23 3
MGP_CASTEiJ_P0055026 RAP PF08373 1.9e-16 1
MGP_CASTEiJ_P0055026 FAST_2 PF08368 2.2e-26 2
MGP_CASTEiJ_P0055026 FAST_1 PF06743 1.9e-23 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Fastkd1-001 MGP_CASTEiJ_T0055026 2870 829aa MGP_CASTEiJ_P0055026"/note="transcript_id=MGP_CASTEiJ_T0055026
- MGP_CASTEiJ_T0055027 2511 800aa MGP_CASTEiJ_P0055027"/note="transcript_id=MGP_CASTEiJ_T0055027
- MGP_CASTEiJ_T0055028 2416 No protein -
- MGP_CASTEiJ_T0055029 3172 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P002736942.539721.1111mus_musculus_casteijMGP_CASTEiJ_P005502632.328116.0434
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P001949831.640113.4978mus_musculus_casteijMGP_CASTEiJ_P005502626.296711.2183
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005759531.846315.3656mus_musculus_casteijMGP_CASTEiJ_P005502631.001214.9578
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P003718535.098319.062mus_musculus_casteijMGP_CASTEiJ_P005502627.985515.199
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P007063534.862418.7156mus_musculus_casteijMGP_CASTEiJ_P005502622.919212.304

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.517599.2762mus_musculus_129s1svimjMGP_129S1SvImJ_P005513999.517599.2762
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502697.828796.2606mus_caroliMGP_CAROLIEiJ_P005212497.828796.2606
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_ajMGP_AJ_P005516199.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_balbcjMGP_BALBcJ_P005510099.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_dba2jMGP_DBA2J_P005488799.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.517599.2762mus_musculus_c57bl6njMGP_C57BL6NJ_P005558499.517599.2762
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_fvbnjMGP_FVBNJ_P005485199.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_c3hhejMGP_C3HHeJ_P005483199.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_lpjMGP_LPJ_P005498899.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_nodshiltjMGP_NODShiLtJ_P005483399.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_cbajMGP_CBAJ_P005478599.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.517599.2762mus_musculusENSMUSP0000007289699.517599.2762
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_nzohlltjMGP_NZOHlLtJ_P005573199.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.758799.3969mus_musculus_pwkphjMGP_PWKPhJ_P005462799.758799.3969
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502697.466894.0893mus_pahariMGP_PahariEiJ_P006312297.466894.0893
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381mus_musculus_akrjMGP_AKRJ_P005511999.879499.6381
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.396998.7937mus_spretusMGP_SPRETEiJ_P005419899.396998.7937
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502694.692488.661rattus_norvegicusENSRNOP0000002903594.35188.3413
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.517599.035mus_spicilegusENSMSIP0000000578399.517599.035
MGP_CASTEiJ_G0024998mus_musculus_casteijMGP_CASTEiJ_P005502699.758799.6381mus_musculus_wsbeijMGP_WSBEiJ_P005410499.758799.6381

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression