RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0024998 | Gene ID |
|
Accession |
- |
Symbol |
Fastkd1 |
Alias |
- |
Full Name |
FAST kinase domains 1 |
Status |
Confidence |
Length |
29826 bases |
Strand |
Minus strand |
Position |
2 : 69134252 - 69164077 |
RNA binding domain |
RAP , FAST_2 , FAST_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0055027 |
RAP |
PF08373 |
1.9e-16 |
1 |
MGP_CASTEiJ_P0055027 |
FAST_2 |
PF08368 |
3.3e-26 |
2 |
MGP_CASTEiJ_P0055027 |
FAST_1 |
PF06743 |
2e-23 |
3 |
MGP_CASTEiJ_P0055026 |
RAP |
PF08373 |
1.9e-16 |
1 |
MGP_CASTEiJ_P0055026 |
FAST_2 |
PF08368 |
2.2e-26 |
2 |
MGP_CASTEiJ_P0055026 |
FAST_1 |
PF06743 |
1.9e-23 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Fastkd1-001 |
MGP_CASTEiJ_T0055026 |
2870 |
829aa |
MGP_CASTEiJ_P0055026"/note="transcript_id=MGP_CASTEiJ_T0055026 |
- |
MGP_CASTEiJ_T0055027 |
2511 |
800aa |
MGP_CASTEiJ_P0055027"/note="transcript_id=MGP_CASTEiJ_T0055027 |
- |
MGP_CASTEiJ_T0055028 |
2416 |
No protein |
- |
- |
MGP_CASTEiJ_T0055029 |
3172 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0027369 | 42.5397 | 21.1111 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 32.3281 | 16.0434 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0019498 | 31.6401 | 13.4978 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 26.2967 | 11.2183 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0057595 | 31.8463 | 15.3656 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 31.0012 | 14.9578 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0037185 | 35.0983 | 19.062 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 27.9855 | 15.199 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0070635 | 34.8624 | 18.7156 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 22.9192 | 12.304 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.5175 | 99.2762 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0055139 | 99.5175 | 99.2762 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 97.8287 | 96.2606 | mus_caroli | MGP_CAROLIEiJ_P0052124 | 97.8287 | 96.2606 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_aj | MGP_AJ_P0055161 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_balbcj | MGP_BALBcJ_P0055100 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_dba2j | MGP_DBA2J_P0054887 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.5175 | 99.2762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0055584 | 99.5175 | 99.2762 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_fvbnj | MGP_FVBNJ_P0054851 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_c3hhej | MGP_C3HHeJ_P0054831 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_lpj | MGP_LPJ_P0054988 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0054833 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_cbaj | MGP_CBAJ_P0054785 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.5175 | 99.2762 | mus_musculus | ENSMUSP00000072896 | 99.5175 | 99.2762 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0055731 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.7587 | 99.3969 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054627 | 99.7587 | 99.3969 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 97.4668 | 94.0893 | mus_pahari | MGP_PahariEiJ_P0063122 | 97.4668 | 94.0893 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.8794 | 99.6381 | mus_musculus_akrj | MGP_AKRJ_P0055119 | 99.8794 | 99.6381 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.3969 | 98.7937 | mus_spretus | MGP_SPRETEiJ_P0054198 | 99.3969 | 98.7937 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 94.6924 | 88.661 | rattus_norvegicus | ENSRNOP00000029035 | 94.351 | 88.3413 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.5175 | 99.035 | mus_spicilegus | ENSMSIP00000005783 | 99.5175 | 99.035 |
MGP_CASTEiJ_G0024998 | mus_musculus_casteij | MGP_CASTEiJ_P0055026 | 99.7587 | 99.6381 | mus_musculus_wsbeij | MGP_WSBEiJ_P0054104 | 99.7587 | 99.6381 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |