Description

Ensembl ID MGP_CASTEiJ_G0024785 Gene ID Accession -
Symbol Exosc2 Alias - Full Name exosome component 2
Status Confidence Length 11404 bases Strand Plus strand
Position 2 : 29641032 - 29652435 RNA binding domain ECR1_N , KH_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0053846 ECR1_N PF14382 5.8e-16 1
MGP_CASTEiJ_P0053845 ECR1_N PF14382 4.3e-15 1
MGP_CASTEiJ_P0053845 KH_6 PF15985 2e-12 2
MGP_CASTEiJ_P0053843 ECR1_N PF14382 5.5e-15 1
MGP_CASTEiJ_P0053843 KH_6 PF15985 2.6e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc2-001 MGP_CASTEiJ_T0053843 1645 293aa MGP_CASTEiJ_P0053843"/note="transcript_id=MGP_CASTEiJ_T0053843
- MGP_CASTEiJ_T0053844 2076 No protein -
- MGP_CASTEiJ_T0053845 747 247aa MGP_CASTEiJ_P0053845"/note="transcript_id=MGP_CASTEiJ_T0053845
- MGP_CASTEiJ_T0053846 518 74aa MGP_CASTEiJ_P0053846"/note="transcript_id=MGP_CASTEiJ_T0053846
- MGP_CASTEiJ_T0053847 566 No protein -
- MGP_CASTEiJ_T0053848 496 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P006551331.386918.9781mus_musculus_casteijMGP_CASTEiJ_P005384329.351517.7474

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0053985100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_caroliMGP_CAROLIEiJ_P0050982100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_ajMGP_AJ_P0053999100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_balbcjMGP_BALBcJ_P0053943100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_dba2jMGP_DBA2J_P0053729100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0054430100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_fvbnjMGP_FVBNJ_P0053690100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_c3hhejMGP_C3HHeJ_P0053675100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_lpjMGP_LPJ_P0053835100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_cbajMGP_CBAJ_P0053621100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculusENSMUSP00000043519100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0054569100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_pwkphjMGP_PWKPhJ_P0053447100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P005384310099.6587mus_pahariMGP_PahariEiJ_P006199410099.6587
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_akrjMGP_AKRJ_P0053953100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_spretusMGP_SPRETEiJ_P0053020100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P005384399.658797.2696rattus_norvegicusENSRNOP0000001231199.658797.2696
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_spicilegusENSMSIP00000023396100100
MGP_CASTEiJ_G0024785mus_musculus_casteijMGP_CASTEiJ_P0053843100100mus_musculus_wsbeijMGP_WSBEiJ_P0052948100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression