Description

Ensembl ID MGP_CASTEiJ_G0023908 Gene ID Accession -
Symbol Sart1 Alias - Full Name squamous cell carcinoma antigen recognized by T cells 1
Status Confidence Length 12206 bases Strand Minus strand
Position 19 : 2307515 - 2319720 RNA binding domain SART-1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0050357 SART-1 PF03343 1.1e-136 1
MGP_CASTEiJ_P0050357 SART-1 PF03343 1.1e-136 2
MGP_CASTEiJ_P0050356 SART-1 PF03343 7.3e-134 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sart1-201 MGP_CASTEiJ_T0050356 5102 806aa MGP_CASTEiJ_P0050356"/note="transcript_id=MGP_CASTEiJ_T0050356
- MGP_CASTEiJ_T0050357 2540 810aa MGP_CASTEiJ_P0050357"/note="transcript_id=MGP_CASTEiJ_T0050357

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0023908

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0050555100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.627899.6278mus_caroliMGP_CAROLIEiJ_P004758999.627899.6278
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_ajMGP_AJ_P0050536100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_balbcjMGP_BALBcJ_P0050484100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_dba2jMGP_DBA2J_P0050260100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0050981100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.875999.8759mus_musculus_fvbnjMGP_FVBNJ_P005022799.875999.8759
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_c3hhejMGP_C3HHeJ_P0050228100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_lpjMGP_LPJ_P0050385100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0050225100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_cbajMGP_CBAJ_P0050163100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculusENSMUSP00000047397100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0051093100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.875999.8759mus_musculus_pwkphjMGP_PWKPhJ_P004995399.875999.8759
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.255699.0074mus_pahariMGP_PahariEiJ_P002060299.255699.0074
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_musculus_akrjMGP_AKRJ_P0050489100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P0050356100100mus_spretusMGP_SPRETEiJ_P0049552100100
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.627899.0074rattus_norvegicusENSRNOP0000002781299.627899.0074
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.875999.7519mus_spicilegusENSMSIP0000000406499.875999.7519
MGP_CASTEiJ_G0023908mus_musculus_casteijMGP_CASTEiJ_P005035699.875999.8759mus_musculus_wsbeijMGP_WSBEiJ_P004952499.875999.8759

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression