| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_CASTEiJ_G0023023 | Gene ID |
|
Accession |
- |
| Symbol |
Gm5093 |
Alias |
- |
Full Name |
predicted gene 5093 |
| Status |
Confidence |
Length |
534 bases |
Strand |
Minus strand |
| Position |
17 : 47520183 - 47520716 |
RNA binding domain |
Ribosomal_L5 , Ribosomal_L5_C |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_CASTEiJ_P0047693 |
Ribosomal_L5 |
PF00281 |
1.4e-24 |
1 |
| MGP_CASTEiJ_P0047693 |
Ribosomal_L5_C |
PF00673 |
9.1e-19 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Gm5093-201 |
MGP_CASTEiJ_T0047693 |
534 |
178aa |
MGP_CASTEiJ_P0047693"/note="transcript_id=MGP_CASTEiJ_T0047693 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0048836 | 55.0296 | 47.929 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 52.2472 | 45.5056 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0068770 | 97.7528 | 96.6292 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 97.7528 | 96.6292 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_aj | MGP_AJ_P0047936 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_balbcj | MGP_BALBcJ_P0047898 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_dba2j | MGP_DBA2J_P0047666 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0048387 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_fvbnj | MGP_FVBNJ_P0047629 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_lpj | MGP_LPJ_P0047771 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 97.191 | 96.0674 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047645 | 99.4253 | 98.2759 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 89.8876 | 88.764 | mus_musculus_cbaj | MGP_CBAJ_P0047565 | 91.954 | 90.8046 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0048486 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_pwkphj | MGP_PWKPhJ_P0047275 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 97.7528 | 96.6292 | mus_pahari | MGP_PahariEiJ_P0080311 | 97.7528 | 96.6292 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 96.6292 | 95.5056 | mus_musculus_akrj | MGP_AKRJ_P0047898 | 98.8506 | 97.7011 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 89.3258 | 87.0787 | rattus_norvegicus | ENSRNOP00000037110 | 84.5745 | 82.4468 |
| MGP_CASTEiJ_G0023023 | mus_musculus_casteij | MGP_CASTEiJ_P0047693 | 85.9551 | 84.2697 | mus_musculus_wsbeij | MGP_WSBEiJ_P0046946 | 98.7097 | 96.7742 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
