Description

Ensembl ID MGP_CASTEiJ_G0022766 Gene ID Accession -
Symbol Rps28 Alias - Full Name ribosomal protein S28
Status Confidence Length 5549 bases Strand Minus strand
Position 17 : 33439393 - 33444941 RNA binding domain Ribosomal_S28e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0046709 Ribosomal_S28e PF01200 1.9e-33 1
MGP_CASTEiJ_P0046712 Ribosomal_S28e PF01200 1.9e-33 1
MGP_CASTEiJ_P0046715 Ribosomal_S28e PF01200 1.9e-33 1
MGP_CASTEiJ_P0046716 Ribosomal_S28e PF01200 1.9e-33 1
MGP_CASTEiJ_P0046713 Ribosomal_S28e PF01200 9.1e-31 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rps28-001 MGP_CASTEiJ_T0046709 437 69aa MGP_CASTEiJ_P0046709"/note="transcript_id=MGP_CASTEiJ_T0046709
- MGP_CASTEiJ_T0046712 392 69aa MGP_CASTEiJ_P0046712"/note="transcript_id=MGP_CASTEiJ_T0046712
- MGP_CASTEiJ_T0046713 342 56aa MGP_CASTEiJ_P0046713"/note="transcript_id=MGP_CASTEiJ_T0046713
- MGP_CASTEiJ_T0046714 372 No protein -
- MGP_CASTEiJ_T0046715 382 69aa MGP_CASTEiJ_P0046715"/note="transcript_id=MGP_CASTEiJ_T0046715
- MGP_CASTEiJ_T0046716 271 69aa MGP_CASTEiJ_P0046716"/note="transcript_id=MGP_CASTEiJ_T0046716
- MGP_CASTEiJ_T0046717 809 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P006356097.101497.1014mus_musculus_casteijMGP_CASTEiJ_P004670997.101497.1014

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0046936100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_caroliMGP_CAROLIEiJ_P0044034100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_ajMGP_AJ_P0046915100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_balbcjMGP_BALBcJ_P0046872100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_dba2jMGP_DBA2J_P0046662100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0047360100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_fvbnjMGP_FVBNJ_P0046617100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_c3hhejMGP_C3HHeJ_P0046608100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_lpjMGP_LPJ_P0046755100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0046604100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_cbajMGP_CBAJ_P0046543100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculusENSMUSP00000134615100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0047450100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_pwkphjMGP_PWKPhJ_P0046294100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_pahariMGP_PahariEiJ_P0043589100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_akrjMGP_AKRJ_P0046868100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_spretusMGP_SPRETEiJ_P0045939100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P004670992.753692.7536rattus_norvegicusENSRNOP0000004419792.753692.7536
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P004670998.550798.5507rattus_norvegicusENSRNOP0000009580398.550798.5507
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P004670997.101495.6522rattus_norvegicusENSRNOP0000003927697.101495.6522
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100rattus_norvegicusENSRNOP00000078298100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100rattus_norvegicusENSRNOP00000060568100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_spicilegusENSMSIP00000010224100100
MGP_CASTEiJ_G0022766mus_musculus_casteijMGP_CASTEiJ_P0046709100100mus_musculus_wsbeijMGP_WSBEiJ_P0045965100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression