| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_CASTEiJ_G0022766 | Gene ID |
|
Accession |
- |
| Symbol |
Rps28 |
Alias |
- |
Full Name |
ribosomal protein S28 |
| Status |
Confidence |
Length |
5549 bases |
Strand |
Minus strand |
| Position |
17 : 33439393 - 33444941 |
RNA binding domain |
Ribosomal_S28e |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_CASTEiJ_P0046709 |
Ribosomal_S28e |
PF01200 |
1.9e-33 |
1 |
| MGP_CASTEiJ_P0046712 |
Ribosomal_S28e |
PF01200 |
1.9e-33 |
1 |
| MGP_CASTEiJ_P0046715 |
Ribosomal_S28e |
PF01200 |
1.9e-33 |
1 |
| MGP_CASTEiJ_P0046716 |
Ribosomal_S28e |
PF01200 |
1.9e-33 |
1 |
| MGP_CASTEiJ_P0046713 |
Ribosomal_S28e |
PF01200 |
9.1e-31 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Rps28-001 |
MGP_CASTEiJ_T0046709 |
437 |
69aa |
MGP_CASTEiJ_P0046709"/note="transcript_id=MGP_CASTEiJ_T0046709 |
| - |
MGP_CASTEiJ_T0046712 |
392 |
69aa |
MGP_CASTEiJ_P0046712"/note="transcript_id=MGP_CASTEiJ_T0046712 |
| - |
MGP_CASTEiJ_T0046713 |
342 |
56aa |
MGP_CASTEiJ_P0046713"/note="transcript_id=MGP_CASTEiJ_T0046713 |
| - |
MGP_CASTEiJ_T0046714 |
372 |
No protein |
- |
| - |
MGP_CASTEiJ_T0046715 |
382 |
69aa |
MGP_CASTEiJ_P0046715"/note="transcript_id=MGP_CASTEiJ_T0046715 |
| - |
MGP_CASTEiJ_T0046716 |
271 |
69aa |
MGP_CASTEiJ_P0046716"/note="transcript_id=MGP_CASTEiJ_T0046716 |
| - |
MGP_CASTEiJ_T0046717 |
809 |
No protein |
- |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0063560 | 97.1014 | 97.1014 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 97.1014 | 97.1014 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0046936 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0044034 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0046915 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0046872 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0046662 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0047360 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0046617 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0046608 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0046755 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0046604 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0046543 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus | ENSMUSP00000134615 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0047450 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0046294 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0043589 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0046868 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0045939 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 92.7536 | 92.7536 | rattus_norvegicus | ENSRNOP00000044197 | 92.7536 | 92.7536 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 98.5507 | 98.5507 | rattus_norvegicus | ENSRNOP00000095803 | 98.5507 | 98.5507 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 97.1014 | 95.6522 | rattus_norvegicus | ENSRNOP00000039276 | 97.1014 | 95.6522 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | rattus_norvegicus | ENSRNOP00000078298 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | rattus_norvegicus | ENSRNOP00000060568 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_spicilegus | ENSMSIP00000010224 | 100 | 100 |
| MGP_CASTEiJ_G0022766 | mus_musculus_casteij | MGP_CASTEiJ_P0046709 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0045965 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |