Description

Ensembl ID MGP_CASTEiJ_G0021241 Gene ID Accession -
Symbol Exosc4 Alias - Full Name exosome component 4
Status Confidence Length 3279 bases Strand Plus strand
Position 15 : 76455600 - 76458878 RNA binding domain RNase_PH , RNase_PH_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0041142 RNase_PH PF01138 9.2e-34 1
MGP_CASTEiJ_P0041142 RNase_PH_C PF03725 1.2e-08 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc4-001 MGP_CASTEiJ_T0041142 1796 245aa MGP_CASTEiJ_P0041142"/note="transcript_id=MGP_CASTEiJ_T0041142
- MGP_CASTEiJ_T0041143 288 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P008250247.659631.0638mus_musculus_casteijMGP_CASTEiJ_P004114245.714329.7959

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0041381100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_caroliMGP_CAROLIEiJ_P0038622100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_ajMGP_AJ_P0041344100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_balbcjMGP_BALBcJ_P0041341100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_dba2jMGP_DBA2J_P0041138100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0041818100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_fvbnjMGP_FVBNJ_P0041112100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_c3hhejMGP_C3HHeJ_P0041076100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_lpjMGP_LPJ_P0041209100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0041090100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_cbajMGP_CBAJ_P0040985100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculusENSMUSP00000050940100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0041857100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_pwkphjMGP_PWKPhJ_P0040723100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P004114299.183799.1837mus_pahariMGP_PahariEiJ_P004199499.183799.1837
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_akrjMGP_AKRJ_P0041316100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_spretusMGP_SPRETEiJ_P0040431100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P004114298.775598.3673rattus_norvegicusENSRNOP0000001646498.775598.3673
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P004114295.510295.5102mus_spicilegusENSMSIP00000027965100100
MGP_CASTEiJ_G0021241mus_musculus_casteijMGP_CASTEiJ_P0041142100100mus_musculus_wsbeijMGP_WSBEiJ_P0040470100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression