RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0021241 | Gene ID |
|
Accession |
- |
Symbol |
Exosc4 |
Alias |
- |
Full Name |
exosome component 4 |
Status |
Confidence |
Length |
3279 bases |
Strand |
Plus strand |
Position |
15 : 76455600 - 76458878 |
RNA binding domain |
RNase_PH , RNase_PH_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0041142 |
RNase_PH |
PF01138 |
9.2e-34 |
1 |
MGP_CASTEiJ_P0041142 |
RNase_PH_C |
PF03725 |
1.2e-08 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Exosc4-001 |
MGP_CASTEiJ_T0041142 |
1796 |
245aa |
MGP_CASTEiJ_P0041142"/note="transcript_id=MGP_CASTEiJ_T0041142 |
- |
MGP_CASTEiJ_T0041143 |
288 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0082502 | 47.6596 | 31.0638 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 45.7143 | 29.7959 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0041381 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0038622 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0041344 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0041341 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0041138 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0041818 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0041112 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0041076 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0041209 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0041090 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0040985 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus | ENSMUSP00000050940 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0041857 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0040723 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 99.1837 | 99.1837 | mus_pahari | MGP_PahariEiJ_P0041994 | 99.1837 | 99.1837 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0041316 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0040431 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 98.7755 | 98.3673 | rattus_norvegicus | ENSRNOP00000016464 | 98.7755 | 98.3673 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 95.5102 | 95.5102 | mus_spicilegus | ENSMSIP00000027965 | 100 | 100 |
MGP_CASTEiJ_G0021241 | mus_musculus_casteij | MGP_CASTEiJ_P0041142 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0040470 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |