RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0020323 | Gene ID |
|
Accession |
- |
Symbol |
Polr3a |
Alias |
- |
Full Name |
polymerase (RNA) III (DNA directed) polypeptide A |
Status |
Confidence |
Length |
44628 bases |
Strand |
Minus strand |
Position |
14 : 17352512 - 17397139 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0038255 |
RNA_pol_Rpb1_4 |
PF05000 |
7.4e-32 |
1 |
MGP_CASTEiJ_P0038255 |
RNA_pol_Rpb1_1 |
PF04997 |
1.2e-22 |
2 |
MGP_CASTEiJ_P0038255 |
RNA_pol_Rpb1_5 |
PF04998 |
3.3e-89 |
3 |
MGP_CASTEiJ_P0038255 |
RNA_pol_Rpb1_2 |
PF00623 |
1.1e-34 |
4 |
MGP_CASTEiJ_P0038255 |
RNA_pol_Rpb1_2 |
PF00623 |
1.1e-34 |
5 |
MGP_CASTEiJ_P0038255 |
RNA_pol_Rpb1_3 |
PF04983 |
1.4e-23 |
6 |
MGP_CASTEiJ_P0038254 |
RNA_pol_Rpb1_4 |
PF05000 |
1e-31 |
1 |
MGP_CASTEiJ_P0038254 |
RNA_pol_Rpb1_1 |
PF04997 |
2.8e-96 |
2 |
MGP_CASTEiJ_P0038254 |
RNA_pol_Rpb1_5 |
PF04998 |
8.4e-89 |
3 |
MGP_CASTEiJ_P0038254 |
RNA_pol_Rpb1_2 |
PF00623 |
1.6e-74 |
4 |
MGP_CASTEiJ_P0038254 |
RNA_pol_Rpb1_3 |
PF04983 |
9.5e-42 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Polr3a-201 |
MGP_CASTEiJ_T0038254 |
4685 |
1390aa |
MGP_CASTEiJ_P0038254"/note="transcript_id=MGP_CASTEiJ_T0038254 |
- |
MGP_CASTEiJ_T0038255 |
3355 |
1064aa |
MGP_CASTEiJ_P0038255"/note="transcript_id=MGP_CASTEiJ_T0038255 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0029494 | 37.9188 | 25.1777 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 53.741 | 35.6835 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0078246 | 40.4193 | 25.6261 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 49.9281 | 31.6547 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0038543 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 99.9281 | 99.8561 | mus_caroli | MGP_CAROLIEiJ_P0035848 | 99.9281 | 99.8561 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0038502 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0038508 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0038314 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0038964 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0038284 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0038251 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0038432 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0038266 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0038169 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus | ENSMUSP00000026322 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0039009 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 95.8993 | 95.8993 | mus_musculus_pwkphj | MGP_PWKPhJ_P0037875 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 99.9281 | 99.7122 | mus_pahari | MGP_PahariEiJ_P0083945 | 99.9281 | 99.7122 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0038467 | 100 | 100 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 97.4101 | 97.2662 | mus_spretus | MGP_SPRETEiJ_P0037532 | 99.7055 | 99.5582 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 93.2374 | 92.6619 | rattus_norvegicus | ENSRNOP00000013501 | 99.4628 | 98.8488 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 99.8561 | 99.6403 | mus_spicilegus | ENSMSIP00000019747 | 99.8561 | 99.6403 |
MGP_CASTEiJ_G0020323 | mus_musculus_casteij | MGP_CASTEiJ_P0038254 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0037658 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |