Description

Ensembl ID MGP_CASTEiJ_G0020323 Gene ID Accession -
Symbol Polr3a Alias - Full Name polymerase (RNA) III (DNA directed) polypeptide A
Status Confidence Length 44628 bases Strand Minus strand
Position 14 : 17352512 - 17397139 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0038255 RNA_pol_Rpb1_4 PF05000 7.4e-32 1
MGP_CASTEiJ_P0038255 RNA_pol_Rpb1_1 PF04997 1.2e-22 2
MGP_CASTEiJ_P0038255 RNA_pol_Rpb1_5 PF04998 3.3e-89 3
MGP_CASTEiJ_P0038255 RNA_pol_Rpb1_2 PF00623 1.1e-34 4
MGP_CASTEiJ_P0038255 RNA_pol_Rpb1_2 PF00623 1.1e-34 5
MGP_CASTEiJ_P0038255 RNA_pol_Rpb1_3 PF04983 1.4e-23 6
MGP_CASTEiJ_P0038254 RNA_pol_Rpb1_4 PF05000 1e-31 1
MGP_CASTEiJ_P0038254 RNA_pol_Rpb1_1 PF04997 2.8e-96 2
MGP_CASTEiJ_P0038254 RNA_pol_Rpb1_5 PF04998 8.4e-89 3
MGP_CASTEiJ_P0038254 RNA_pol_Rpb1_2 PF00623 1.6e-74 4
MGP_CASTEiJ_P0038254 RNA_pol_Rpb1_3 PF04983 9.5e-42 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Polr3a-201 MGP_CASTEiJ_T0038254 4685 1390aa MGP_CASTEiJ_P0038254"/note="transcript_id=MGP_CASTEiJ_T0038254
- MGP_CASTEiJ_T0038255 3355 1064aa MGP_CASTEiJ_P0038255"/note="transcript_id=MGP_CASTEiJ_T0038255

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P002949437.918825.1777mus_musculus_casteijMGP_CASTEiJ_P003825453.74135.6835
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P007824640.419325.6261mus_musculus_casteijMGP_CASTEiJ_P003825449.928131.6547

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0038543100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P003825499.928199.8561mus_caroliMGP_CAROLIEiJ_P003584899.928199.8561
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_ajMGP_AJ_P0038502100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_balbcjMGP_BALBcJ_P0038508100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_dba2jMGP_DBA2J_P0038314100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0038964100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_fvbnjMGP_FVBNJ_P0038284100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_c3hhejMGP_C3HHeJ_P0038251100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_lpjMGP_LPJ_P0038432100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0038266100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_cbajMGP_CBAJ_P0038169100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculusENSMUSP00000026322100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0039009100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P003825495.899395.8993mus_musculus_pwkphjMGP_PWKPhJ_P0037875100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P003825499.928199.7122mus_pahariMGP_PahariEiJ_P008394599.928199.7122
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_akrjMGP_AKRJ_P0038467100100
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P003825497.410197.2662mus_spretusMGP_SPRETEiJ_P003753299.705599.5582
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P003825493.237492.6619rattus_norvegicusENSRNOP0000001350199.462898.8488
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P003825499.856199.6403mus_spicilegusENSMSIP0000001974799.856199.6403
MGP_CASTEiJ_G0020323mus_musculus_casteijMGP_CASTEiJ_P0038254100100mus_musculus_wsbeijMGP_WSBEiJ_P0037658100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression