Description

Ensembl ID MGP_CASTEiJ_G0018890 Gene ID Accession -
Symbol Pum2 Alias - Full Name pumilio RNA-binding family member 2
Status Confidence Length 86473 bases Strand Plus strand
Position 12 : 5776092 - 5862564 RNA binding domain PUF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 1
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 2
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 3
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 4
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 5
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 6
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 7
MGP_CASTEiJ_P0034038 PUF PF00806 5.5e-86 8
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 1
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 2
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 3
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 4
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 5
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 6
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 7
MGP_CASTEiJ_P0034037 PUF PF00806 5.7e-86 8
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 1
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 2
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 3
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 4
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 5
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 6
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 7
MGP_CASTEiJ_P0034044 PUF PF00806 5.7e-86 8
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 1
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 2
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 3
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 4
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 5
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 6
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 7
MGP_CASTEiJ_P0034040 PUF PF00806 7.1e-86 8
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 1
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 2
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 3
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 4
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 5
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 6
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 7
MGP_CASTEiJ_P0034036 PUF PF00806 1.2e-85 8
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 1
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 2
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 3
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 4
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 5
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 6
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 7
MGP_CASTEiJ_P0034039 PUF PF00806 1.2e-85 8
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 1
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 2
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 3
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 4
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 5
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 6
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 7
MGP_CASTEiJ_P0034043 PUF PF00806 3.1e-84 8
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 1
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 2
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 3
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 4
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 5
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 6
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 7
MGP_CASTEiJ_P0034045 PUF PF00806 3.1e-84 8
MGP_CASTEiJ_P0034051 PUF PF00806 1.2e-44 1
MGP_CASTEiJ_P0034051 PUF PF00806 1.2e-44 2
MGP_CASTEiJ_P0034051 PUF PF00806 1.2e-44 3
MGP_CASTEiJ_P0034051 PUF PF00806 1.2e-44 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pum2-001 MGP_CASTEiJ_T0034036 4984 1064aa MGP_CASTEiJ_P0034036"/note="transcript_id=MGP_CASTEiJ_T0034036
- MGP_CASTEiJ_T0034037 5874 985aa MGP_CASTEiJ_P0034037"/note="transcript_id=MGP_CASTEiJ_T0034037
- MGP_CASTEiJ_T0034038 3587 980aa MGP_CASTEiJ_P0034038"/note="transcript_id=MGP_CASTEiJ_T0034038
- MGP_CASTEiJ_T0034039 6311 1064aa MGP_CASTEiJ_P0034039"/note="transcript_id=MGP_CASTEiJ_T0034039
- MGP_CASTEiJ_T0034040 3644 1008aa MGP_CASTEiJ_P0034040"/note="transcript_id=MGP_CASTEiJ_T0034040
- MGP_CASTEiJ_T0034041 518 No protein -
- MGP_CASTEiJ_T0034042 6218 35aa MGP_CASTEiJ_P0034042"/note="transcript_id=MGP_CASTEiJ_T0034042
- MGP_CASTEiJ_T0034043 3560 1066aa MGP_CASTEiJ_P0034043"/note="transcript_id=MGP_CASTEiJ_T0034043
- MGP_CASTEiJ_T0034044 3295 985aa MGP_CASTEiJ_P0034044"/note="transcript_id=MGP_CASTEiJ_T0034044
- MGP_CASTEiJ_T0034045 6226 1066aa MGP_CASTEiJ_P0034045"/note="transcript_id=MGP_CASTEiJ_T0034045
- MGP_CASTEiJ_T0034046 902 262aa MGP_CASTEiJ_P0034046"/note="transcript_id=MGP_CASTEiJ_T0034046
- MGP_CASTEiJ_T0034047 648 185aa MGP_CASTEiJ_P0034047"/note="transcript_id=MGP_CASTEiJ_T0034047
- MGP_CASTEiJ_T0034048 472 109aa MGP_CASTEiJ_P0034048"/note="transcript_id=MGP_CASTEiJ_T0034048
- MGP_CASTEiJ_T0034049 994 35aa MGP_CASTEiJ_P0034049"/note="transcript_id=MGP_CASTEiJ_T0034049
- MGP_CASTEiJ_T0034050 706 234aa MGP_CASTEiJ_P0034050"/note="transcript_id=MGP_CASTEiJ_T0034050
- MGP_CASTEiJ_T0034051 665 221aa MGP_CASTEiJ_P0034051"/note="transcript_id=MGP_CASTEiJ_T0034051
- MGP_CASTEiJ_T0034052 612 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P006824477.291870.143mus_musculus_casteijMGP_CASTEiJ_P003404586.210178.2364

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0034427100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P003404599.624899.3433mus_caroliMGP_CAROLIEiJ_P003188599.624899.3433
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_ajMGP_AJ_P0034359100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_balbcjMGP_BALBcJ_P0034355100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_dba2jMGP_DBA2J_P0034189100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0034852100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_fvbnjMGP_FVBNJ_P0034185100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_c3hhejMGP_C3HHeJ_P0034137100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_lpjMGP_LPJ_P0034328100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0034191100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_cbajMGP_CBAJ_P0034050100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculusENSMUSP00000128292100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0034901100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_pwkphjMGP_PWKPhJ_P0033734100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P003404599.812499.531mus_pahariMGP_PahariEiJ_P008200199.718899.4377
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_akrjMGP_AKRJ_P0034342100100
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P003404599.906299.8124mus_spretusMGP_SPRETEiJ_P003334899.906299.8124
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P003404599.718699.3433rattus_norvegicusENSRNOP0000007459299.625199.2502
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P003404599.812499.7186mus_spicilegusENSMSIP0000000486910099.906
MGP_CASTEiJ_G0018890mus_musculus_casteijMGP_CASTEiJ_P0034045100100mus_musculus_wsbeijMGP_WSBEiJ_P0033603100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression