RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0018890 | Gene ID |
|
Accession |
- |
Symbol |
Pum2 |
Alias |
- |
Full Name |
pumilio RNA-binding family member 2 |
Status |
Confidence |
Length |
86473 bases |
Strand |
Plus strand |
Position |
12 : 5776092 - 5862564 |
RNA binding domain |
PUF |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
1 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
2 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
3 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
4 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
5 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
6 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
7 |
MGP_CASTEiJ_P0034038 |
PUF |
PF00806 |
5.5e-86 |
8 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
1 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
2 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
3 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
4 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
5 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
6 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
7 |
MGP_CASTEiJ_P0034037 |
PUF |
PF00806 |
5.7e-86 |
8 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
1 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
2 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
3 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
4 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
5 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
6 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
7 |
MGP_CASTEiJ_P0034044 |
PUF |
PF00806 |
5.7e-86 |
8 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
1 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
2 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
3 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
4 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
5 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
6 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
7 |
MGP_CASTEiJ_P0034040 |
PUF |
PF00806 |
7.1e-86 |
8 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
1 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
2 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
3 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
4 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
5 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
6 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
7 |
MGP_CASTEiJ_P0034036 |
PUF |
PF00806 |
1.2e-85 |
8 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
1 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
2 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
3 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
4 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
5 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
6 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
7 |
MGP_CASTEiJ_P0034039 |
PUF |
PF00806 |
1.2e-85 |
8 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
1 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
2 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
3 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
4 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
5 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
6 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
7 |
MGP_CASTEiJ_P0034043 |
PUF |
PF00806 |
3.1e-84 |
8 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
1 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
2 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
3 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
4 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
5 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
6 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
7 |
MGP_CASTEiJ_P0034045 |
PUF |
PF00806 |
3.1e-84 |
8 |
MGP_CASTEiJ_P0034051 |
PUF |
PF00806 |
1.2e-44 |
1 |
MGP_CASTEiJ_P0034051 |
PUF |
PF00806 |
1.2e-44 |
2 |
MGP_CASTEiJ_P0034051 |
PUF |
PF00806 |
1.2e-44 |
3 |
MGP_CASTEiJ_P0034051 |
PUF |
PF00806 |
1.2e-44 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Pum2-001 |
MGP_CASTEiJ_T0034036 |
4984 |
1064aa |
MGP_CASTEiJ_P0034036"/note="transcript_id=MGP_CASTEiJ_T0034036 |
- |
MGP_CASTEiJ_T0034037 |
5874 |
985aa |
MGP_CASTEiJ_P0034037"/note="transcript_id=MGP_CASTEiJ_T0034037 |
- |
MGP_CASTEiJ_T0034038 |
3587 |
980aa |
MGP_CASTEiJ_P0034038"/note="transcript_id=MGP_CASTEiJ_T0034038 |
- |
MGP_CASTEiJ_T0034039 |
6311 |
1064aa |
MGP_CASTEiJ_P0034039"/note="transcript_id=MGP_CASTEiJ_T0034039 |
- |
MGP_CASTEiJ_T0034040 |
3644 |
1008aa |
MGP_CASTEiJ_P0034040"/note="transcript_id=MGP_CASTEiJ_T0034040 |
- |
MGP_CASTEiJ_T0034041 |
518 |
No protein |
- |
- |
MGP_CASTEiJ_T0034042 |
6218 |
35aa |
MGP_CASTEiJ_P0034042"/note="transcript_id=MGP_CASTEiJ_T0034042 |
- |
MGP_CASTEiJ_T0034043 |
3560 |
1066aa |
MGP_CASTEiJ_P0034043"/note="transcript_id=MGP_CASTEiJ_T0034043 |
- |
MGP_CASTEiJ_T0034044 |
3295 |
985aa |
MGP_CASTEiJ_P0034044"/note="transcript_id=MGP_CASTEiJ_T0034044 |
- |
MGP_CASTEiJ_T0034045 |
6226 |
1066aa |
MGP_CASTEiJ_P0034045"/note="transcript_id=MGP_CASTEiJ_T0034045 |
- |
MGP_CASTEiJ_T0034046 |
902 |
262aa |
MGP_CASTEiJ_P0034046"/note="transcript_id=MGP_CASTEiJ_T0034046 |
- |
MGP_CASTEiJ_T0034047 |
648 |
185aa |
MGP_CASTEiJ_P0034047"/note="transcript_id=MGP_CASTEiJ_T0034047 |
- |
MGP_CASTEiJ_T0034048 |
472 |
109aa |
MGP_CASTEiJ_P0034048"/note="transcript_id=MGP_CASTEiJ_T0034048 |
- |
MGP_CASTEiJ_T0034049 |
994 |
35aa |
MGP_CASTEiJ_P0034049"/note="transcript_id=MGP_CASTEiJ_T0034049 |
- |
MGP_CASTEiJ_T0034050 |
706 |
234aa |
MGP_CASTEiJ_P0034050"/note="transcript_id=MGP_CASTEiJ_T0034050 |
- |
MGP_CASTEiJ_T0034051 |
665 |
221aa |
MGP_CASTEiJ_P0034051"/note="transcript_id=MGP_CASTEiJ_T0034051 |
- |
MGP_CASTEiJ_T0034052 |
612 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0068244 | 77.2918 | 70.143 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 86.2101 | 78.2364 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0034427 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 99.6248 | 99.3433 | mus_caroli | MGP_CAROLIEiJ_P0031885 | 99.6248 | 99.3433 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0034359 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0034355 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0034189 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034852 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0034185 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034137 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0034328 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034191 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0034050 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus | ENSMUSP00000128292 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0034901 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0033734 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 99.8124 | 99.531 | mus_pahari | MGP_PahariEiJ_P0082001 | 99.7188 | 99.4377 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0034342 | 100 | 100 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 99.9062 | 99.8124 | mus_spretus | MGP_SPRETEiJ_P0033348 | 99.9062 | 99.8124 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 99.7186 | 99.3433 | rattus_norvegicus | ENSRNOP00000074592 | 99.6251 | 99.2502 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 99.8124 | 99.7186 | mus_spicilegus | ENSMSIP00000004869 | 100 | 99.906 |
MGP_CASTEiJ_G0018890 | mus_musculus_casteij | MGP_CASTEiJ_P0034045 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0033603 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |