Description

Ensembl ID MGP_CASTEiJ_G0017419 Gene ID Accession -
Symbol Pnpt1 Alias - Full Name polyribonucleotide nucleotidyltransferase 1
Status Confidence Length 33118 bases Strand Plus strand
Position 11 : 26932870 - 26965987 RNA binding domain RNase_PH , RNase_PH_C , PNPase , KH_1 , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0027718 RNase_PH PF01138 2e-38 1
MGP_CASTEiJ_P0027718 RNase_PH PF01138 2e-38 2
MGP_CASTEiJ_P0027718 RNase_PH_C PF03725 2.1e-16 3
MGP_CASTEiJ_P0027718 PNPase PF03726 5.7e-07 4
MGP_CASTEiJ_P0027718 KH_1 PF00013 4.7e-07 5
MGP_CASTEiJ_P0027718 S1 PF00575 1.4e-05 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pnpt1-002 MGP_CASTEiJ_T0027716 3323 No protein -
- MGP_CASTEiJ_T0027717 459 No protein -
- MGP_CASTEiJ_T0027718 2576 783aa MGP_CASTEiJ_P0027718"/note="transcript_id=MGP_CASTEiJ_T0027718
- MGP_CASTEiJ_T0027719 587 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0017419

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_129s1svimjMGP_129S1SvImJ_P002833899.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.616999.106mus_caroliMGP_CAROLIEiJ_P002595999.489898.9796
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P0027718100100mus_musculus_ajMGP_AJ_P0028303100100
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_balbcjMGP_BALBcJ_P002828199.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771897.31897.318mus_musculus_dba2jMGP_DBA2J_P002813797.31897.318
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_c57bl6njMGP_C57BL6NJ_P002878199.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_fvbnjMGP_FVBNJ_P002812399.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P0027718100100mus_musculus_c3hhejMGP_C3HHeJ_P0028084100100
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_lpjMGP_LPJ_P002825299.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_nodshiltjMGP_NODShiLtJ_P002810999.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_cbajMGP_CBAJ_P002800699.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculusENSMUSP0000002075699.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P0027718100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028815100100
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771897.701197.318mus_musculus_pwkphjMGP_PWKPhJ_P002742698.582598.1959
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.233797.8289mus_pahariMGP_PahariEiJ_P002999399.107197.7041
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_akrjMGP_AKRJ_P002826699.872399.8723
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.744699.4891mus_spretusMGP_SPRETEiJ_P002729699.617399.3622
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771898.339796.2963rattus_norvegicusENSRNOP0000000491998.214396.1735
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.7446mus_spicilegusENSMSIP0000002085699.744999.6173
MGP_CASTEiJ_G0017419mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723mus_musculus_wsbeijMGP_WSBEiJ_P002759299.872399.8723

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression