RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_CASTEiJ_G0017419 | Gene ID |
|
Accession |
- |
Symbol |
Pnpt1 |
Alias |
- |
Full Name |
polyribonucleotide nucleotidyltransferase 1 |
Status |
Confidence |
Length |
33118 bases |
Strand |
Plus strand |
Position |
11 : 26932870 - 26965987 |
RNA binding domain |
RNase_PH , RNase_PH_C , PNPase , KH_1 , S1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_CASTEiJ_P0027718 |
RNase_PH |
PF01138 |
2e-38 |
1 |
MGP_CASTEiJ_P0027718 |
RNase_PH |
PF01138 |
2e-38 |
2 |
MGP_CASTEiJ_P0027718 |
RNase_PH_C |
PF03725 |
2.1e-16 |
3 |
MGP_CASTEiJ_P0027718 |
PNPase |
PF03726 |
5.7e-07 |
4 |
MGP_CASTEiJ_P0027718 |
KH_1 |
PF00013 |
4.7e-07 |
5 |
MGP_CASTEiJ_P0027718 |
S1 |
PF00575 |
1.4e-05 |
6 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Pnpt1-002 |
MGP_CASTEiJ_T0027716 |
3323 |
No protein |
- |
- |
MGP_CASTEiJ_T0027717 |
459 |
No protein |
- |
- |
MGP_CASTEiJ_T0027718 |
2576 |
783aa |
MGP_CASTEiJ_P0027718"/note="transcript_id=MGP_CASTEiJ_T0027718 |
- |
MGP_CASTEiJ_T0027719 |
587 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0017419 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0028338 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.6169 | 99.106 | mus_caroli | MGP_CAROLIEiJ_P0025959 | 99.4898 | 98.9796 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0028303 | 100 | 100 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_balbcj | MGP_BALBcJ_P0028281 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 97.318 | 97.318 | mus_musculus_dba2j | MGP_DBA2J_P0028137 | 97.318 | 97.318 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0028781 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_fvbnj | MGP_FVBNJ_P0028123 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028084 | 100 | 100 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_lpj | MGP_LPJ_P0028252 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0028109 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_cbaj | MGP_CBAJ_P0028006 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus | ENSMUSP00000020756 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0028815 | 100 | 100 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 97.7011 | 97.318 | mus_musculus_pwkphj | MGP_PWKPhJ_P0027426 | 98.5825 | 98.1959 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.2337 | 97.8289 | mus_pahari | MGP_PahariEiJ_P0029993 | 99.1071 | 97.7041 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_akrj | MGP_AKRJ_P0028266 | 99.8723 | 99.8723 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.7446 | 99.4891 | mus_spretus | MGP_SPRETEiJ_P0027296 | 99.6173 | 99.3622 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 98.3397 | 96.2963 | rattus_norvegicus | ENSRNOP00000004919 | 98.2143 | 96.1735 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.7446 | mus_spicilegus | ENSMSIP00000020856 | 99.7449 | 99.6173 |
MGP_CASTEiJ_G0017419 | mus_musculus_casteij | MGP_CASTEiJ_P0027718 | 99.8723 | 99.8723 | mus_musculus_wsbeij | MGP_WSBEiJ_P0027592 | 99.8723 | 99.8723 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |