Description

Ensembl ID MGP_CASTEiJ_G0017344 Gene ID Accession -
Symbol Tbrg4 Alias - Full Name transforming growth factor beta regulated gene 4
Status Confidence Length 11822 bases Strand Minus strand
Position 11 : 3647223 - 3659044 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_CASTEiJ_P0027368 RAP PF08373 3.6e-10 1
MGP_CASTEiJ_P0027368 FAST_2 PF08368 2.1e-25 2
MGP_CASTEiJ_P0027368 FAST_1 PF06743 5.3e-21 3
MGP_CASTEiJ_P0027369 RAP PF08373 3.6e-10 1
MGP_CASTEiJ_P0027369 FAST_2 PF08368 2.1e-25 2
MGP_CASTEiJ_P0027369 FAST_1 PF06743 5.3e-21 3
MGP_CASTEiJ_P0027370 RAP PF08373 3.6e-10 1
MGP_CASTEiJ_P0027370 FAST_2 PF08368 2.1e-25 2
MGP_CASTEiJ_P0027370 FAST_1 PF06743 5.3e-21 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tbrg4-001 MGP_CASTEiJ_T0027368 2324 630aa MGP_CASTEiJ_P0027368"/note="transcript_id=MGP_CASTEiJ_T0027368
- MGP_CASTEiJ_T0027369 2347 630aa MGP_CASTEiJ_P0027369"/note="transcript_id=MGP_CASTEiJ_T0027369
- MGP_CASTEiJ_T0027370 2290 630aa MGP_CASTEiJ_P0027370"/note="transcript_id=MGP_CASTEiJ_T0027370
- MGP_CASTEiJ_T0027371 2241 365aa MGP_CASTEiJ_P0027371"/note="transcript_id=MGP_CASTEiJ_T0027371
- MGP_CASTEiJ_T0027372 682 No protein -
- MGP_CASTEiJ_T0027373 582 No protein -
- MGP_CASTEiJ_T0027374 602 No protein -
- MGP_CASTEiJ_T0027375 652 No protein -
- MGP_CASTEiJ_T0027376 380 No protein -
- MGP_CASTEiJ_T0027377 647 158aa MGP_CASTEiJ_P0027377"/note="transcript_id=MGP_CASTEiJ_T0027377
- MGP_CASTEiJ_T0027378 853 No protein -
- MGP_CASTEiJ_T0027379 540 112aa MGP_CASTEiJ_P0027379"/note="transcript_id=MGP_CASTEiJ_T0027379

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P005502632.328116.0434mus_musculus_casteijMGP_CASTEiJ_P002736942.539721.1111
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P001949832.075514.6589mus_musculus_casteijMGP_CASTEiJ_P002736935.079416.0317
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P005759526.765813.1351mus_musculus_casteijMGP_CASTEiJ_P002736934.285716.8254
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P003718534.039317.8517mus_musculus_casteijMGP_CASTEiJ_P002736935.714318.7302
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P007063533.761517.9817mus_musculus_casteijMGP_CASTEiJ_P002736929.206315.5556

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P002736999.047698.254mus_caroliMGP_CAROLIEiJ_P002563299.047698.254
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_ajMGP_AJ_P0027985100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_balbcjMGP_BALBcJ_P0027965100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_dba2jMGP_DBA2J_P0027817100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_fvbnjMGP_FVBNJ_P0027806100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_c3hhejMGP_C3HHeJ_P0027761100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_lpjMGP_LPJ_P0027933100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027788100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_cbajMGP_CBAJ_P0027690100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculusENSMUSP00000140835100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028491100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_pwkphjMGP_PWKPhJ_P0027065100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P002736998.571497.4603mus_pahariMGP_PahariEiJ_P003030998.728197.6153
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_akrjMGP_AKRJ_P0027945100100
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P002736999.841399.6825mus_spretusMGP_SPRETEiJ_P002696999.841399.6825
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P002736996.507992.5397rattus_norvegicusENSRNOP0000007422396.661492.6868
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P002736999.682598.8889mus_spicilegusENSMSIP0000002729599.682598.8889
MGP_CASTEiJ_G0017344mus_musculus_casteijMGP_CASTEiJ_P0027369100100mus_musculus_wsbeijMGP_WSBEiJ_P0027272100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression