Description

Ensembl ID MGP_C57BL6NJ_G0036099 Gene ID Accession -
Symbol Rbm10 Alias - Full Name RNA binding motif protein 10
Status Confidence Length 42012 bases Strand Plus strand
Position X : 15908641 - 15950652 RNA binding domain G-patch , OCRE , zf-RanBP , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0096283 G-patch PF01585 2e-18 1
MGP_C57BL6NJ_P0096283 OCRE PF17780 1.9e-17 2
MGP_C57BL6NJ_P0096283 zf-RanBP PF00641 2e-06 3
MGP_C57BL6NJ_P0096283 RRM_1 PF00076 7.5e-10 4
MGP_C57BL6NJ_P0096286 G-patch PF01585 2e-18 1
MGP_C57BL6NJ_P0096286 OCRE PF17780 1.9e-17 2
MGP_C57BL6NJ_P0096286 zf-RanBP PF00641 2e-06 3
MGP_C57BL6NJ_P0096286 RRM_1 PF00076 7.5e-10 4
MGP_C57BL6NJ_P0096281 G-patch PF01585 2.2e-18 1
MGP_C57BL6NJ_P0096281 OCRE PF17780 5e-18 2
MGP_C57BL6NJ_P0096281 zf-RanBP PF00641 2.2e-06 3
MGP_C57BL6NJ_P0096281 RRM_1 PF00076 7.6e-13 4
MGP_C57BL6NJ_P0096287 G-patch PF01585 2.2e-18 1
MGP_C57BL6NJ_P0096287 OCRE PF17780 5e-18 2
MGP_C57BL6NJ_P0096287 zf-RanBP PF00641 2.2e-06 3
MGP_C57BL6NJ_P0096287 RRM_1 PF00076 7.6e-13 4
MGP_C57BL6NJ_P0096282 G-patch PF01585 2.2e-18 1
MGP_C57BL6NJ_P0096282 OCRE PF17780 5e-18 2
MGP_C57BL6NJ_P0096282 zf-RanBP PF00641 2.2e-06 3
MGP_C57BL6NJ_P0096282 RRM_1 PF00076 1e-12 4
MGP_C57BL6NJ_P0096285 G-patch PF01585 2.2e-18 1
MGP_C57BL6NJ_P0096285 OCRE PF17780 5e-18 2
MGP_C57BL6NJ_P0096285 zf-RanBP PF00641 2.2e-06 3
MGP_C57BL6NJ_P0096285 RRM_1 PF00076 1e-12 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rbm10-001 MGP_C57BL6NJ_T0096281 3698 929aa MGP_C57BL6NJ_P0096281"/note="transcript_id=MGP_C57BL6NJ_T0096281
- MGP_C57BL6NJ_T0096282 3564 930aa MGP_C57BL6NJ_P0096282"/note="transcript_id=MGP_C57BL6NJ_T0096282
- MGP_C57BL6NJ_T0096283 3172 853aa MGP_C57BL6NJ_P0096283"/note="transcript_id=MGP_C57BL6NJ_T0096283
- MGP_C57BL6NJ_T0096284 2160 No protein -
- MGP_C57BL6NJ_T0096285 2793 930aa MGP_C57BL6NJ_P0096285"/note="transcript_id=MGP_C57BL6NJ_T0096285
- MGP_C57BL6NJ_T0096286 2562 853aa MGP_C57BL6NJ_P0096286"/note="transcript_id=MGP_C57BL6NJ_T0096286
- MGP_C57BL6NJ_T0096287 2790 929aa MGP_C57BL6NJ_P0096287"/note="transcript_id=MGP_C57BL6NJ_T0096287

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009488573.374257.6687mus_musculus_c57bl6njMGP_C57BL6NJ_P009628264.301150.5376
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009491346.774224.7312mus_musculus_c57bl6njMGP_C57BL6NJ_P00962829.354844.94624

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628299.462499.2473mus_caroliMGP_CAROLIEiJ_P009110099.569499.3541
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628293.978593.9785mus_musculus_ajMGP_AJ_P0095836100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628299.892599.7849mus_musculus_balbcjMGP_BALBcJ_P009575596.770896.6667
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0095751100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628299.892599.7849mus_musculus_lpjMGP_LPJ_P009547099.892599.7849
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628297.634497.5269mus_musculus_c3hhejMGP_C3HHeJ_P009533487.140187.0441
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculusENSMUSP00000111032100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculus_cbajMGP_CBAJ_P0095248100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628299.247398.8172mus_pahariMGP_PahariEiJ_P008874199.354198.9236
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_spretusMGP_SPRETEiJ_P009485187.901787.9017
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628293.010793.0107mus_musculus_fvbnjMGP_FVBNJ_P009529798.072698.0726
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628289.784988.6021mus_spicilegusENSMSIP0000000209098.004796.7136
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculus_dba2jMGP_DBA2J_P0095449100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628291.397991.3979mus_musculus_wsbeijMGP_WSBEiJ_P009431388.449588.4495
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628290.752790.6452mus_musculus_casteijMGP_CASTEiJ_P009593592.039391.9302
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628293.978593.9785mus_musculus_nzohlltjMGP_NZOHlLtJ_P0096608100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculus_pwkphjMGP_PWKPhJ_P0095346100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0095271100100
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P0096282100100mus_musculus_akrjMGP_AKRJ_P009579387.901787.9017
MGP_C57BL6NJ_G0036099mus_musculus_c57bl6njMGP_C57BL6NJ_P009628298.279697.7419rattus_norvegicusENSRNOP0000008455298.704198.1641

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression