RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0035762 | Gene ID |
|
Accession |
- |
Symbol |
Rbm5 |
Alias |
- |
Full Name |
RNA binding motif protein 5 |
Status |
Confidence |
Length |
30616 bases |
Strand |
Minus strand |
Position |
9 : 112620421 - 112651036 |
RNA binding domain |
G-patch , OCRE , zf-RanBP , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0094889 |
G-patch |
PF01585 |
9e-19 |
1 |
MGP_C57BL6NJ_P0094889 |
OCRE |
PF17780 |
1.4e-18 |
2 |
MGP_C57BL6NJ_P0094889 |
zf-RanBP |
PF00641 |
1.7e-09 |
3 |
MGP_C57BL6NJ_P0094889 |
RRM_1 |
PF00076 |
3.4e-14 |
4 |
MGP_C57BL6NJ_P0094885 |
G-patch |
PF01585 |
9e-19 |
1 |
MGP_C57BL6NJ_P0094885 |
OCRE |
PF17780 |
1.4e-18 |
2 |
MGP_C57BL6NJ_P0094885 |
zf-RanBP |
PF00641 |
1.7e-09 |
3 |
MGP_C57BL6NJ_P0094885 |
RRM_1 |
PF00076 |
3.4e-14 |
4 |
MGP_C57BL6NJ_P0094890 |
G-patch |
PF01585 |
1.4e-16 |
1 |
MGP_C57BL6NJ_P0094902 |
zf-RanBP |
PF00641 |
4.6e-10 |
1 |
MGP_C57BL6NJ_P0094902 |
RRM_1 |
PF00076 |
3.8e-08 |
2 |
MGP_C57BL6NJ_P0094899 |
RRM_1 |
PF00076 |
2.2e-08 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rbm5-001 |
MGP_C57BL6NJ_T0094885 |
3205 |
815aa |
MGP_C57BL6NJ_P0094885"/note="transcript_id=MGP_C57BL6NJ_T0094885 |
- |
MGP_C57BL6NJ_T0094886 |
6321 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094887 |
2691 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094888 |
2986 |
150aa |
MGP_C57BL6NJ_P0094888"/note="transcript_id=MGP_C57BL6NJ_T0094888 |
- |
MGP_C57BL6NJ_T0094889 |
3064 |
814aa |
MGP_C57BL6NJ_P0094889"/note="transcript_id=MGP_C57BL6NJ_T0094889 |
- |
MGP_C57BL6NJ_T0094890 |
835 |
153aa |
MGP_C57BL6NJ_P0094890"/note="transcript_id=MGP_C57BL6NJ_T0094890 |
- |
MGP_C57BL6NJ_T0094891 |
631 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094892 |
793 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094893 |
4703 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094894 |
1704 |
115aa |
MGP_C57BL6NJ_P0094894"/note="transcript_id=MGP_C57BL6NJ_T0094894 |
- |
MGP_C57BL6NJ_T0094895 |
322 |
100aa |
MGP_C57BL6NJ_P0094895"/note="transcript_id=MGP_C57BL6NJ_T0094895 |
- |
MGP_C57BL6NJ_T0094896 |
500 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094897 |
539 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094898 |
600 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094899 |
896 |
174aa |
MGP_C57BL6NJ_P0094899"/note="transcript_id=MGP_C57BL6NJ_T0094899 |
- |
MGP_C57BL6NJ_T0094900 |
784 |
150aa |
MGP_C57BL6NJ_P0094900"/note="transcript_id=MGP_C57BL6NJ_T0094900 |
- |
MGP_C57BL6NJ_T0094901 |
502 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094902 |
850 |
251aa |
MGP_C57BL6NJ_P0094902"/note="transcript_id=MGP_C57BL6NJ_T0094902 |
- |
MGP_C57BL6NJ_T0094903 |
1939 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094904 |
869 |
137aa |
MGP_C57BL6NJ_P0094904"/note="transcript_id=MGP_C57BL6NJ_T0094904 |
- |
MGP_C57BL6NJ_T0094905 |
781 |
115aa |
MGP_C57BL6NJ_P0094905"/note="transcript_id=MGP_C57BL6NJ_T0094905 |
- |
MGP_C57BL6NJ_T0094906 |
897 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094907 |
1272 |
No protein |
- |
- |
MGP_C57BL6NJ_T0094908 |
1775 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0096282 | 64.3011 | 50.5376 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 73.3742 | 57.6687 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094913 | 33.3333 | 19.8925 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 7.60736 | 4.53988 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 99.8773 | mus_caroli | MGP_CAROLIEiJ_P0089762 | 100 | 99.8773 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0094444 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0094370 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0094354 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0094084 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0093949 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus | ENSMUSP00000138379 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0093865 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 99.8773 | 99.7546 | mus_pahari | MGP_PahariEiJ_P0025442 | 99.8773 | 99.7546 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 99.8773 | 99.8773 | mus_spretus | MGP_SPRETEiJ_P0093482 | 99.8773 | 99.8773 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0093927 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 99.7546 | 99.6319 | mus_spicilegus | ENSMSIP00000027848 | 99.7546 | 99.6319 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0094074 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0092945 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0094547 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0095212 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0093985 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0093904 | 100 | 100 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 100 | 99.8773 | mus_musculus_akrj | MGP_AKRJ_P0094397 | 100 | 99.8773 |
MGP_C57BL6NJ_G0035762 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0094885 | 99.2638 | 98.8957 | rattus_norvegicus | ENSRNOP00000024529 | 99.508 | 99.139 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |