RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0034646 | Gene ID |
|
Accession |
- |
Symbol |
Kars |
Alias |
- |
Full Name |
lysyl-tRNA synthetase |
Status |
Confidence |
Length |
18298 bases |
Strand |
Minus strand |
Position |
8 : 118843291 - 118861588 |
RNA binding domain |
tRNA_anti-codon , tRNA-synt_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0091074 |
tRNA_anti-codon |
PF01336 |
9e-15 |
1 |
MGP_C57BL6NJ_P0091074 |
tRNA-synt_2 |
PF00152 |
2.4e-80 |
2 |
MGP_C57BL6NJ_P0091073 |
tRNA_anti-codon |
PF01336 |
1e-14 |
1 |
MGP_C57BL6NJ_P0091073 |
tRNA-synt_2 |
PF00152 |
2.8e-80 |
2 |
MGP_C57BL6NJ_P0091075 |
tRNA_anti-codon |
PF01336 |
1e-14 |
1 |
MGP_C57BL6NJ_P0091075 |
tRNA-synt_2 |
PF00152 |
2.8e-80 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Kars-001 |
MGP_C57BL6NJ_T0091073 |
2156 |
624aa |
MGP_C57BL6NJ_P0091073"/note="transcript_id=MGP_C57BL6NJ_T0091073 |
- |
MGP_C57BL6NJ_T0091074 |
2007 |
595aa |
MGP_C57BL6NJ_P0091074"/note="transcript_id=MGP_C57BL6NJ_T0091074 |
- |
MGP_C57BL6NJ_T0091075 |
2188 |
624aa |
MGP_C57BL6NJ_P0091075"/note="transcript_id=MGP_C57BL6NJ_T0091075 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0022350 | 41.517 | 23.1537 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 33.3333 | 18.5897 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0050313 | 37.0304 | 19.1413 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 33.1731 | 17.1474 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0023422 | 34.1501 | 19.1424 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 35.7372 | 20.0321 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0085542 | 35.8491 | 18.239 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 27.4038 | 13.9423 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 81.5705 | 81.5705 | mus_caroli | MGP_CAROLIEiJ_P0086107 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0090628 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 99.8397 | 99.8397 | mus_musculus_balbcj | MGP_BALBcJ_P0090553 | 99.8397 | 99.8397 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0090548 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0090300 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0090130 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus | ENSMUSP00000126268 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0090059 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 93.5897 | 91.9872 | mus_pahari | MGP_PahariEiJ_P0054358 | 98.1513 | 96.4706 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 99.8397 | 99.8397 | mus_spretus | MGP_SPRETEiJ_P0089614 | 99.8397 | 99.8397 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0090103 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 95.9936 | 95.5128 | mus_spicilegus | ENSMSIP00000023627 | 94.3307 | 93.8583 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0090269 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 98.5577 | 98.5577 | mus_musculus_wsbeij | MGP_WSBEiJ_P0089168 | 98.5577 | 98.5577 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 94.2308 | 93.2692 | mus_musculus_casteij | MGP_CASTEiJ_P0090680 | 98.8235 | 97.8151 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0091392 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 71.7949 | 69.8718 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090114 | 71.7949 | 69.8718 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0090133 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0090567 | 100 | 100 |
MGP_C57BL6NJ_G0034646 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091075 | 98.8782 | 96.7949 | rattus_norvegicus | ENSRNOP00000044454 | 98.5623 | 96.4856 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |