RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0034012 | Gene ID |
|
Accession |
- |
Symbol |
Wrn |
Alias |
- |
Full Name |
Werner syndrome homolog (human) |
Status |
Confidence |
Length |
155077 bases |
Strand |
Minus strand |
Position |
8 : 32909875 - 33064951 |
RNA binding domain |
DEAD , DNA_pol_A_exo1 , HRDC |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0089102 |
DEAD |
PF00270 |
2.4e-15 |
1 |
MGP_C57BL6NJ_P0089102 |
DNA_pol_A_exo1 |
PF01612 |
4.3e-36 |
2 |
MGP_C57BL6NJ_P0089102 |
HRDC |
PF00570 |
3.6e-13 |
3 |
MGP_C57BL6NJ_P0089103 |
DEAD |
PF00270 |
2.4e-15 |
1 |
MGP_C57BL6NJ_P0089103 |
DNA_pol_A_exo1 |
PF01612 |
4.3e-36 |
2 |
MGP_C57BL6NJ_P0089103 |
HRDC |
PF00570 |
3.6e-13 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Wrn-001 |
MGP_C57BL6NJ_T0089102 |
6372 |
1401aa |
MGP_C57BL6NJ_P0089102"/note="transcript_id=MGP_C57BL6NJ_T0089102 |
- |
MGP_C57BL6NJ_T0089103 |
6262 |
1401aa |
MGP_C57BL6NJ_P0089103"/note="transcript_id=MGP_C57BL6NJ_T0089103 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0041934 | 33.7171 | 17.7632 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 29.2648 | 15.4176 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0081346 | 47.5309 | 27.9321 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 21.9843 | 12.9193 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033994 | 34.2159 | 19.0428 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 23.9829 | 13.3476 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0085228 | 36.9274 | 21.0712 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 37.4019 | 21.3419 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 98.5011 | 97.5018 | mus_caroli | MGP_CAROLIEiJ_P0084137 | 98.5011 | 97.5018 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_aj | MGP_AJ_P0088641 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_balbcj | MGP_BALBcJ_P0088586 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 91.3633 | 89.2934 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0088553 | 91.6905 | 89.6132 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.0721 | mus_musculus_lpj | MGP_LPJ_P0088324 | 99.429 | 99.0721 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 91.5061 | 89.8644 | mus_musculus_c3hhej | MGP_C3HHeJ_P0088149 | 91.8996 | 90.2509 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 100 | 100 | mus_musculus | ENSMUSP00000033991 | 100 | 100 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_cbaj | MGP_CBAJ_P0088100 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 96.217 | 93.7902 | mus_pahari | MGP_PahariEiJ_P0047036 | 96.217 | 93.7902 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.2862 | 98.858 | mus_spretus | MGP_SPRETEiJ_P0087611 | 99.2862 | 98.858 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.0721 | 98.5011 | mus_spicilegus | ENSMSIP00000031480 | 99.0721 | 98.5011 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 97.4304 | 97.0735 | mus_musculus_dba2j | MGP_DBA2J_P0088295 | 99.4898 | 99.1254 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_wsbeij | MGP_WSBEiJ_P0087189 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.6431 | 99.429 | mus_musculus_casteij | MGP_CASTEiJ_P0088684 | 99.6431 | 99.429 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0089392 | 100 | 100 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.8572 | 99.7859 | mus_musculus_pwkphj | MGP_PWKPhJ_P0088101 | 99.8572 | 99.7859 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0088171 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 | mus_musculus_akrj | MGP_AKRJ_P0088567 | 99.429 | 99.1435 |
MGP_C57BL6NJ_G0034012 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 92.0057 | 86.6524 | rattus_norvegicus | ENSRNOP00000055596 | 92.0714 | 86.7143 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |