Description

Ensembl ID MGP_C57BL6NJ_G0030821 Gene ID Accession -
Symbol Polr1d Alias - Full Name polymerase (RNA) I polypeptide D
Status Confidence Length 35872 bases Strand Plus strand
Position 5 : 158291905 - 158327776 RNA binding domain RNA_pol_L_2 , RNA_pol_L
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0076406 RNA_pol_L_2 PF13656 3e-27 1
MGP_C57BL6NJ_P0076406 RNA_pol_L PF01193 1.4e-14 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Polr1d-001 MGP_C57BL6NJ_T0076406 1196 133aa MGP_C57BL6NJ_P0076406"/note="transcript_id=MGP_C57BL6NJ_T0076406
- MGP_C57BL6NJ_T0076407 1137 126aa MGP_C57BL6NJ_P0076407"/note="transcript_id=MGP_C57BL6NJ_T0076407
- MGP_C57BL6NJ_T0076408 1167 33aa MGP_C57BL6NJ_P0076408"/note="transcript_id=MGP_C57BL6NJ_T0076408
- MGP_C57BL6NJ_T0076409 1350 42aa MGP_C57BL6NJ_P0076409"/note="transcript_id=MGP_C57BL6NJ_T0076409
- MGP_C57BL6NJ_T0076410 363 No protein -
- MGP_C57BL6NJ_T0076411 878 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P007552252.136831.6239mus_musculus_c57bl6njMGP_C57BL6NJ_P007640645.864727.8195

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P007640699.248199.2481mus_caroliMGP_CAROLIEiJ_P007222199.248199.2481
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_ajMGP_AJ_P0075989100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_balbcjMGP_BALBcJ_P0075928100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0075912100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_lpjMGP_LPJ_P0075712100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_c3hhejMGP_C3HHeJ_P0075554100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculusENSMUSP00000058355100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_cbajMGP_CBAJ_P0075516100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P007640699.248199.2481mus_pahariMGP_PahariEiJ_P006042999.248199.2481
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P007640610099.2481mus_spretusMGP_SPRETEiJ_P007503810099.2481
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_fvbnjMGP_FVBNJ_P0075556100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_spicilegusENSMSIP0000002853046.503546.5035
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_dba2jMGP_DBA2J_P0075665100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_wsbeijMGP_WSBEiJ_P0074685100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_casteijMGP_CASTEiJ_P0076095100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0076638100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P007640610099.2481mus_musculus_pwkphjMGP_PWKPhJ_P007555210099.2481
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0075579100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P0076406100100mus_musculus_akrjMGP_AKRJ_P0075893100100
MGP_C57BL6NJ_G0030821mus_musculus_c57bl6njMGP_C57BL6NJ_P007640697.744496.9925rattus_norvegicusENSRNOP0000009336597.744496.9925

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression