Description

Ensembl ID MGP_C57BL6NJ_G0030631 Gene ID Accession -
Symbol Polr2j Alias - Full Name polymerase (RNA) II (DNA directed) polypeptide J
Status Confidence Length 6315 bases Strand Plus strand
Position 5 : 145977216 - 145983530 RNA binding domain RNA_pol_L_2 , RNA_pol_L
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0075523 RNA_pol_L_2 PF13656 6.1e-29 1
MGP_C57BL6NJ_P0075523 RNA_pol_L PF01193 2.8e-12 2
MGP_C57BL6NJ_P0075522 RNA_pol_L_2 PF13656 6.9e-29 1
MGP_C57BL6NJ_P0075522 RNA_pol_L PF01193 3.1e-12 2
MGP_C57BL6NJ_P0075524 RNA_pol_L_2 PF13656 4.9e-18 1
MGP_C57BL6NJ_P0075524 RNA_pol_L PF01193 1.2e-05 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Polr2j-001 MGP_C57BL6NJ_T0075522 646 117aa MGP_C57BL6NJ_P0075522"/note="transcript_id=MGP_C57BL6NJ_T0075522
- MGP_C57BL6NJ_T0075523 900 111aa MGP_C57BL6NJ_P0075523"/note="transcript_id=MGP_C57BL6NJ_T0075523
- MGP_C57BL6NJ_T0075524 474 87aa MGP_C57BL6NJ_P0075524"/note="transcript_id=MGP_C57BL6NJ_T0075524

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P007640645.864727.8195mus_musculus_c57bl6njMGP_C57BL6NJ_P007552252.136831.6239

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_caroliMGP_CAROLIEiJ_P0071398100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_ajMGP_AJ_P0075109100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_balbcjMGP_BALBcJ_P0075052100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0075026100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_lpjMGP_LPJ_P0074834100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_c3hhejMGP_C3HHeJ_P0074681100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculusENSMUSP00000038505100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_cbajMGP_CBAJ_P0074630100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P007552293.162492.3077mus_pahariMGP_PahariEiJ_P005964891.596690.7563
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_spretusMGP_SPRETEiJ_P0074167100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_fvbnjMGP_FVBNJ_P0074678100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_spicilegusENSMSIP00000013650100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_dba2jMGP_DBA2J_P0074777100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_wsbeijMGP_WSBEiJ_P0073811100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_casteijMGP_CASTEiJ_P0075233100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0075759100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_pwkphjMGP_PWKPhJ_P0074690100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0074680100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100mus_musculus_akrjMGP_AKRJ_P0075011100100
MGP_C57BL6NJ_G0030631mus_musculus_c57bl6njMGP_C57BL6NJ_P0075522100100rattus_norvegicusENSRNOP00000001941100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression