RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0030631 | Gene ID |
|
Accession |
- |
Symbol |
Polr2j |
Alias |
- |
Full Name |
polymerase (RNA) II (DNA directed) polypeptide J |
Status |
Confidence |
Length |
6315 bases |
Strand |
Plus strand |
Position |
5 : 145977216 - 145983530 |
RNA binding domain |
RNA_pol_L_2 , RNA_pol_L |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0075523 |
RNA_pol_L_2 |
PF13656 |
6.1e-29 |
1 |
MGP_C57BL6NJ_P0075523 |
RNA_pol_L |
PF01193 |
2.8e-12 |
2 |
MGP_C57BL6NJ_P0075522 |
RNA_pol_L_2 |
PF13656 |
6.9e-29 |
1 |
MGP_C57BL6NJ_P0075522 |
RNA_pol_L |
PF01193 |
3.1e-12 |
2 |
MGP_C57BL6NJ_P0075524 |
RNA_pol_L_2 |
PF13656 |
4.9e-18 |
1 |
MGP_C57BL6NJ_P0075524 |
RNA_pol_L |
PF01193 |
1.2e-05 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Polr2j-001 |
MGP_C57BL6NJ_T0075522 |
646 |
117aa |
MGP_C57BL6NJ_P0075522"/note="transcript_id=MGP_C57BL6NJ_T0075522 |
- |
MGP_C57BL6NJ_T0075523 |
900 |
111aa |
MGP_C57BL6NJ_P0075523"/note="transcript_id=MGP_C57BL6NJ_T0075523 |
- |
MGP_C57BL6NJ_T0075524 |
474 |
87aa |
MGP_C57BL6NJ_P0075524"/note="transcript_id=MGP_C57BL6NJ_T0075524 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0076406 | 45.8647 | 27.8195 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 52.1368 | 31.6239 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0071398 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0075109 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0075052 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0075026 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0074834 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0074681 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus | ENSMUSP00000038505 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0074630 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 93.1624 | 92.3077 | mus_pahari | MGP_PahariEiJ_P0059648 | 91.5966 | 90.7563 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0074167 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0074678 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_spicilegus | ENSMSIP00000013650 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0074777 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0073811 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0075233 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0075759 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0074690 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0074680 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0075011 | 100 | 100 |
MGP_C57BL6NJ_G0030631 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0075522 | 100 | 100 | rattus_norvegicus | ENSRNOP00000001941 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |