RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0030518 | Gene ID |
|
Accession |
- |
Symbol |
Arl6ip4 |
Alias |
- |
Full Name |
ADP-ribosylation factor-like 6 interacting protein 4 |
Status |
Confidence |
Length |
2108 bases |
Strand |
Plus strand |
Position |
5 : 132862294 - 132864401 |
RNA binding domain |
SR-25 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0074871 |
SR-25 |
PF10500 |
3.5e-104 |
1 |
MGP_C57BL6NJ_P0074873 |
SR-25 |
PF10500 |
4.6e-93 |
1 |
MGP_C57BL6NJ_P0074872 |
SR-25 |
PF10500 |
1.5e-90 |
1 |
MGP_C57BL6NJ_P0074870 |
SR-25 |
PF10500 |
4e-16 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Arl6ip4-001 |
MGP_C57BL6NJ_T0074870 |
462 |
98aa |
MGP_C57BL6NJ_P0074870"/note="transcript_id=MGP_C57BL6NJ_T0074870 |
- |
MGP_C57BL6NJ_T0074871 |
1192 |
229aa |
MGP_C57BL6NJ_P0074871"/note="transcript_id=MGP_C57BL6NJ_T0074871 |
- |
MGP_C57BL6NJ_T0074872 |
982 |
200aa |
MGP_C57BL6NJ_P0074872"/note="transcript_id=MGP_C57BL6NJ_T0074872 |
- |
MGP_C57BL6NJ_T0074873 |
753 |
226aa |
MGP_C57BL6NJ_P0074873"/note="transcript_id=MGP_C57BL6NJ_T0074873 |
- |
MGP_C57BL6NJ_T0074874 |
294 |
60aa |
MGP_C57BL6NJ_P0074874"/note="transcript_id=MGP_C57BL6NJ_T0074874 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0030518 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 98.2533 | 97.3799 | mus_caroli | MGP_CAROLIEiJ_P0070813 | 98.2533 | 97.3799 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0074464 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0074403 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0074390 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0074187 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0074040 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus | ENSMUSP00000031351 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0073990 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 97.8166 | 95.6332 | mus_pahari | MGP_PahariEiJ_P0059032 | 96.1373 | 93.9914 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 99.1266 | 99.1266 | mus_spretus | MGP_SPRETEiJ_P0073524 | 99.1266 | 99.1266 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0074029 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 98.2533 | 98.2533 | mus_spicilegus | ENSMSIP00000011090 | 97.8261 | 97.8261 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0074128 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 99.5633 | 99.5633 | mus_musculus_wsbeij | MGP_WSBEiJ_P0073164 | 99.5633 | 99.5633 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 99.5633 | 99.5633 | mus_musculus_casteij | MGP_CASTEiJ_P0074590 | 99.5633 | 99.5633 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0075105 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 99.5633 | 99.5633 | mus_musculus_pwkphj | MGP_PWKPhJ_P0074037 | 99.5633 | 99.5633 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0074033 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0074370 | 100 | 100 |
MGP_C57BL6NJ_G0030518 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074871 | 96.0699 | 91.7031 | rattus_norvegicus | ENSRNOP00000001432 | 95.2381 | 90.9091 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |