RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0030403 | Gene ID |
|
Accession |
- |
Symbol |
Rplp0 |
Alias |
- |
Full Name |
ribosomal protein, large, P0 |
Status |
Confidence |
Length |
4558 bases |
Strand |
Plus strand |
Position |
5 : 123011851 - 123016408 |
RNA binding domain |
Ribosomal_L10 , Ribosomal_60s |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0074198 |
Ribosomal_L10 |
PF00466 |
2.9e-21 |
1 |
MGP_C57BL6NJ_P0074196 |
Ribosomal_L10 |
PF00466 |
1.4e-20 |
1 |
MGP_C57BL6NJ_P0074196 |
Ribosomal_60s |
PF00428 |
2.9e-21 |
2 |
MGP_C57BL6NJ_P0074197 |
Ribosomal_L10 |
PF00466 |
4.2e-12 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rplp0-001 |
MGP_C57BL6NJ_T0074196 |
1358 |
317aa |
MGP_C57BL6NJ_P0074196"/note="transcript_id=MGP_C57BL6NJ_T0074196 |
- |
MGP_C57BL6NJ_T0074197 |
854 |
221aa |
MGP_C57BL6NJ_P0074197"/note="transcript_id=MGP_C57BL6NJ_T0074197 |
- |
MGP_C57BL6NJ_T0074198 |
694 |
145aa |
MGP_C57BL6NJ_P0074198"/note="transcript_id=MGP_C57BL6NJ_T0074198 |
- |
MGP_C57BL6NJ_T0074199 |
600 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0088159 | 46.087 | 28.6957 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 16.7192 | 10.4101 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065389 | 39.4737 | 27.193 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 14.1956 | 9.77918 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0093246 | 40.3509 | 28.0702 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 14.511 | 10.0946 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0037935 | 91.1602 | 85.0829 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 52.0505 | 48.5804 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.3691 | 99.3691 | mus_caroli | MGP_CAROLIEiJ_P0070172 | 99.3691 | 99.3691 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 69.7161 | 69.7161 | mus_musculus_aj | MGP_AJ_P0073781 | 100 | 100 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_musculus_balbcj | MGP_BALBcJ_P0073721 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0073718 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 97.7918 | 97.7918 | mus_musculus_c3hhej | MGP_C3HHeJ_P0073370 | 98.7261 | 98.7261 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 100 | 100 | mus_musculus | ENSMUSP00000083705 | 100 | 100 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0073322 | 100 | 100 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 56.1514 | 55.205 | mus_pahari | MGP_PahariEiJ_P0058394 | 98.8889 | 97.2222 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 80.1262 | 78.8644 | mus_spretus | MGP_SPRETEiJ_P0072856 | 93.3824 | 91.9118 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_musculus_fvbnj | MGP_FVBNJ_P0073358 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 43.8486 | 43.8486 | mus_spicilegus | ENSMSIP00000027642 | 98.5816 | 98.5816 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_spicilegus | ENSMSIP00000012919 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 98.4227 | 98.4227 | mus_musculus_dba2j | MGP_DBA2J_P0073458 | 98.7342 | 98.7342 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_musculus_wsbeij | MGP_WSBEiJ_P0072503 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 23.9748 | 20.5047 | mus_musculus_casteij | MGP_CASTEiJ_P0025054 | 82.6087 | 70.6522 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 39.1167 | 29.653 | mus_musculus_casteij | MGP_CASTEiJ_P0073912 | 43.9716 | 33.3333 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 69.7161 | 69.7161 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0074423 | 100 | 100 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 79.8107 | 78.2334 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061664 | 75.2976 | 73.8095 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 57.4132 | 53.3123 | mus_musculus_pwkphj | MGP_PWKPhJ_P0073366 | 55.8282 | 51.8405 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0073352 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.6845 | 99.6845 | mus_musculus_akrj | MGP_AKRJ_P0073707 | 99.6845 | 99.6845 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 99.0536 | 98.1073 | rattus_norvegicus | ENSRNOP00000001518 | 99.0536 | 98.1073 |
MGP_C57BL6NJ_G0030403 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0074196 | 89.5899 | 86.1199 | rattus_norvegicus | ENSRNOP00000046157 | 90.1587 | 86.6667 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |